Sequence of DPV Citrus tristeza virus

Citrus tristeza virus clone 108 P18 gene, complete cds.

ACC No: HQ329199

Dated: 2010-12-29 | Length: 504 | CRC: -904898144

                
ID   HQ329199; SV 1; linear; genomic RNA; STD; VRL; 504 BP.
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AC   HQ329199;
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DT   29-DEC-2010 (Rel. 107, Created)
DT   29-DEC-2010 (Rel. 107, Last updated, Version 1)
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DE   Citrus tristeza virus clone 108 P18 gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-504
RA   Atta S.;
RT   "citrus tristeza virus from Pakistan";
RL   Unpublished.
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RN   [2]
RP   1-504
RA   Atta S.;
RT   ;
RL   Submitted (30-SEP-2010) to the EMBL/GenBank/DDBJ databases.
RL   Sequencing Lab, Shanghai Biosune Biotechnology Co. Ltd., Donglan Road No.
RL   248, 5th floor, Shanghai 201102, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .504
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sinensis"
FT                   /mol_type="genomic RNA"
FT                   /country="Pakistan"
FT                   /collection_date="2008"
FT                   /clone="108"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .504
FT                   /codon_start=1
FT                   /product="P18"
FT                   /protein_id="ADU02529.1"
FT                   /translation="MSGSLGNLTHVDLLRSDSRFLSGWWSFIVNVGDIIVRFALHVPSE
FT                   DVLNSFSAISNCTIIADGSALLKDNTVVDRLEGMNPLAYLLKLAKTTTTICFTMSNKVL
FT                   FGTTKSEPLSCLAITSDRVLFKVIMGTNVDDSRCGCSVWFYNNGTFQNGLTRCNNLVAL
FT                   FSVT"
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SQ   Sequence 504 BP; 126 A; 89 C; 113 G; 176 T; 0 other;

hq329199 Length: 504  29-DEC-2010  Type: N  Check: 4704  ..

       1  atgtcaggca gcttgggaaa tttaacacac gttgatctat tgcgttctga
      51  ttcccggttt ctatcgggat ggtggagttt cattgttaat gtgggtgaca
     101  taatcgtccg gtttgcgtta catgttccta gtgaagatgt gctgaatagt
     151  ttttcggcta tatcgaattg cacaatcata gcagacggta gtgccttact
     201  aaaagacaac accgtcgttg accgtttaga aggcatgaat cctttggctt
     251  atttgttaaa attagcgaaa acgactacta ctatttgttt tactatgtct
     301  aataaggttc tttttggtac tactaaatcc gaaccactta gttgtttagc
     351  tatcacatcg gatcgagttt tattcaaagt tattatgggt actaatgtcg
     401  atgattctcg gtgcggctgc agtgtttggt tttacaacaa tgggacgttt
     451  caaaacggat tgacccgttg taacaatctc gtcgctttgt ttagcgtgac
     501  ttag