Sequence of DPV Dahlia mosaic virus

Dahlia mosaic virus D10 movement protein gene, complete cds.

ACC No: HQ416675

Dated: 2011-11-15 | Length: 993 | CRC: 1070177815

                
ID   HQ416675; SV 1; linear; genomic DNA; STD; VRL; 993 BP.
XX
AC   HQ416675;
XX
DT   19-APR-2011 (Rel. 108, Created)
DT   15-NOV-2011 (Rel. 110, Last updated, Version 3)
XX
DE   Dahlia mosaic virus D10 movement protein gene, complete cds.
XX
KW   .
XX
OS   Dahlia mosaic virus D10
OC   Viruses; Retro-transcribing viruses; Caulimoviridae; Caulimovirus.
XX
RN   [1]
RP   1-993
RX   PUBMED; 21837417.
RA   Eid S., Almeyda C.V., Saar D.E., Druffel K.L., Pappu H.R.;
RT   "Genomic characterization of pararetroviral sequences in wild Dahlia spp.
RT   in natural habitats";
RL   Arch. Virol. 156(11):2079-2084(2011).
XX
RN   [2]
RP   1-993
RA   Eid S., Almeyda C., Saar D., Druffel K., Pappu H.;
RT   ;
RL   Submitted (18-OCT-2010) to the INSDC.
RL   Plant Pathology, Washington State University, 100 Dairy Rd, Pullman, WA
RL   99164, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .993
FT                   /organism="Dahlia mosaic virus D10"
FT                   /host="Dahlia tenuicaulis"
FT                   /isolate="D10"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico"
FT                   /collection_date="Aug-2006"
FT                   /db_xref="taxon:1006328"
FT   CDS             1. .993
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:F5A7F8"
FT                   /db_xref="InterPro:IPR001022"
FT                   /db_xref="UniProtKB/TrEMBL:F5A7F8"
FT                   /protein_id="AEB54982.1"
FT                   /translation="MDRNDLFDLNKDDSEKSFNQEITEVINFSETEKGFVSDYMINSDY
FT                   LEKIMKLKLKLDTKQVFNQPSNLQRLVSKAFSRKNNIFYCFNTEELSVDIKDTTGEVYL
FT                   PLLTKGEIARRLLTIKPELRKTMNMVHIGAVKILLKAQFRDGINFPIKMALVDNRIINR
FT                   QDALLGAVQGNLAYGKFMFTVYPKFASHRDSKYFDKTLSFIHQCERTDLMEPGNKVFTI
FT                   NYLISYALTNSTHSIEYKEKESITLDDVFSEIGTVEGSKFAEPSQIQENWAIDIARGKQ
FT                   TLGFQPRNSFTGIPLQIGESSRNTEIQLIRSMSEKVDMYGEILREMIGK"
XX
SQ   Sequence 993 BP; 382 A; 149 C; 177 G; 285 T; 0 other;

hq416675 Length: 993  15-NOV-2011  Type: N  Check: 495  ..

       1  atggatcgta atgatttatt tgatttaaat aaagatgatt cggaaaaatc
      51  atttaaccaa gaaattactg aggtaataaa cttcagtgaa acagaaaaag
     101  gctttgtatc agactacatg attaattctg attatttaga aaaaatcatg
     151  aagcttaaat taaagcttga tacaaaacag gtttttaatc aaccaagtaa
     201  tttacagaga ttagtttcaa aagctttctc tagaaaaaat aatatctttt
     251  attgctttaa tactgaagaa ttgtcagtag atataaaaga tactacaggt
     301  gaagtgtatt taccacttct aacaaaagga gaaatagcca gaagacttct
     351  gactattaaa cctgaattaa gaaaaaccat gaatatggtg cacatcggag
     401  cagtaaaaat ccttctgaag gcacagttca gagatggaat caacttcccg
     451  ataaaaatgg ctttagttga taacagaatt atcaacaggc aagacgctct
     501  actaggcgca gttcaaggaa atttagcata cggtaaattt atgtttactg
     551  tttatcctaa atttgcatca catcgagatt caaaatattt cgataaaacc
     601  ttaagtttca tacatcagtg cgaaaggact gacctcatgg aaccaggtaa
     651  caaagttttt acgattaatt atttaatttc gtatgctttg actaacagta
     701  ctcattcaat tgagtataaa gaaaaggaga gtataacact tgatgatgta
     751  ttctcagaaa taggtactgt cgaaggaagc aagttcgctg aaccttctca
     801  gatacaagaa aattgggcga ttgacattgc tcgaggaaaa caaactctag
     851  gatttcaacc tagaaatagt tttacaggaa tccctttaca aataggcgag
     901  tccagtagaa acacagaaat acagcttatt cggtctatgt ccgaaaaagt
     951  agacatgtat ggagaaatcc ttagagaaat gattgggaaa tga