Sequence of DPV Beet western yellows virus

Beet western yellows virus isolate 6pCP coat protein gene, partial cds; and movement protein gene, complete cds.

ACC No: HQ543079

Dated: 2013-01-28 | Length: 588 | CRC: -2058656133

                
ID   HQ543079; SV 1; linear; genomic RNA; STD; VRL; 588 BP.
XX
AC   HQ543079;
XX
DT   13-JUN-2011 (Rel. 109, Created)
DT   28-JAN-2013 (Rel. 115, Last updated, Version 2)
XX
DE   Beet western yellows virus isolate 6pCP coat protein gene, partial cds; and
DE   movement protein gene, complete cds.
XX
KW   .
XX
OS   Beet western yellows virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Polerovirus.
XX
RN   [1]
RP   1-588
RA   Dann A.L., Wilson C.R.;
RT   "Molecular survey of Poleroviruses (Luteoviridae) infecting peas (Pisum
RT   sativum L.) and broccoli (Brassica oleracea var. italica) in Tasmania";
RL   Unpublished.
XX
RN   [2]
RP   1-588
RA   Dann A.L., Wilson C.R.;
RT   ;
RL   Submitted (05-NOV-2010) to the INSDC.
RL   Tasmanian Institute of Agricultural Research, University of Tasmania, 13 St
RL   Johns Avenue, New Town, Tasmania 7008, Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .588
FT                   /organism="Beet western yellows virus"
FT                   /host="Pisum sativum"
FT                   /isolate="6pCP"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collected_by="Susan Lambert"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:12042"
FT   CDS             1. .>588
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="P3"
FT                   /db_xref="GOA:F8S7W1"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:F8S7W1"
FT                   /protein_id="AEH27553.1"
FT                   /translation="MNTVVGRRTINGRRRPRRQARRAQRSQPVVVVQTSRTTQRRPRRR
FT                   RRGNNRTRGAVSTRGASSSETFVFSKDNLAGSSSGAITFGPSLSDCPAFSNGILKAYHE
FT                   YKISMVILEFVSEASSQNSGSIAYELDPHCKLNSLSSTINKFGITKPGRRAFTASYING
FT                   TEWHDVAEDQFRILYKGNGSSSIAGSFRITIKY"
FT   CDS             32. .559
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="P4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:F8S7W2"
FT                   /protein_id="AEH27554.1"
FT                   /translation="MEEDDHGGKHDALSALSQWLWSKPLGQHNADLDDDEEVITGQEEL
FT                   FLPEEQAQARHLFSRKTISREVPAEQSRSGRVYQTAQHSLMEYSRPTMSIKSRWSFWSS
FT                   SPKPLPKTPVPSLTSWTHTVNSTPFPQLSTNSGSQSPGGGRLQRLTSTGRNGTTLPRIN
FT                   SGSSTKAMVLHR"
XX
SQ   Sequence 588 BP; 168 A; 153 C; 142 G; 125 T; 0 other;

hq543079 Length: 588  28-JAN-2013  Type: N  Check: 9918  ..

       1  atgaatacgg tcgtgggtag gagaacaatc aatggaagaa gacgaccacg
      51  gaggcaagca cgacgcgctc agcgctctca gccagtggtt gtggtccaaa
     101  cctctcggac aacacaacgc cgacctagac gacgacgaag aggtaataac
     151  cggacaagag gagctgtttc taccagagga gcaagctcaa gcgagacatt
     201  tgttttctcg aaagacaatc tcgcgggaag ttccagcgga gcaatcacgt
     251  tcgggccgag tctatcagac tgcccagcat tctctaatgg aatactcaag
     301  gcctaccatg agtataaaat ctcgatggtc attttggagt tcgtctccga
     351  agcctcttcc caaaactccg gttccatcgc ttacgagctg gacccacact
     401  gtaaactcaa ctccctttcc tcaactatca acaaattcgg gatcacaaag
     451  cccgggagga gggcgtttac agcgtcttac atcaacggga cggaatggca
     501  cgacgttgcc gaggatcaat tcaggatcct ctacaaaggc aatggttctt
     551  catcgatagc tggttctttt agaatcacta taaagtac