Sequence of DPV Cucurbit aphid-borne yellows virus

Cucurbit aphid-borne yellows virus-like isolate 21pCP coat protein gene, complete cds; and movement protein gene, partial cds.

ACC No: HQ543091

Dated: 2013-01-28 | Length: 600 | CRC: 122879255

                
ID   HQ543091; SV 1; linear; genomic RNA; STD; VRL; 600 BP.
XX
AC   HQ543091;
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DT   13-JUN-2011 (Rel. 109, Created)
DT   28-JAN-2013 (Rel. 115, Last updated, Version 2)
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DE   Cucurbit aphid-borne yellows virus-like isolate 21pCP coat protein gene,
DE   complete cds; and movement protein gene, partial cds.
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KW   .
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OS   Cucurbit aphid-borne yellows virus-like
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   unclassified Luteoviridae.
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RN   [1]
RP   1-600
RA   Dann A.L., Wilson C.R.;
RT   "Molecular survey of Poleroviruses (Luteoviridae) infecting peas (Pisum
RT   sativum L.) and broccoli (Brassica oleracea var. italica) in Tasmania";
RL   Unpublished.
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RN   [2]
RP   1-600
RA   Dann A.L., Wilson C.R.;
RT   ;
RL   Submitted (05-NOV-2010) to the INSDC.
RL   Tasmanian Institute of Agricultural Research, University of Tasmania, 13 St
RL   Johns Avenue, New Town, Tasmania 7008, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .600
FT                   /organism="Cucurbit aphid-borne yellows virus-like"
FT                   /host="Pisum sativum"
FT                   /isolate="21pCP"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collected_by="Susan Lambert"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:1286610"
FT   CDS             1. .600
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="P3"
FT                   /db_xref="GOA:F8S7Y5"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:F8S7Y5"
FT                   /protein_id="AEH27577.1"
FT                   /translation="MNTGAARNHGMGRRRRRNRRVTRRQRVVVVQAPGLPRRGRRQRRN
FT                   RRRASRGGRAGGGRSSETFVLSKDNLAGSSSGSITFGPSLSEKPEFSSGILKAYHEYKI
FT                   IMVTLEFISEASATSSGSIAYELDPHCKYSSLQSSINKFGITKNGSRSWSSKFINGEEW
FT                   HDASEDQFRILYKGNGASSIAGSFRITFKCQVQNPK"
FT   CDS             26. .>600
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="P4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:F8S7Y6"
FT                   /protein_id="AEH27578.1"
FT                   /translation="MAWGDADGATDALRGVSEWLWSKPLGYHAAEDDNDETADALLEEA
FT                   ELEEDARAKHLCYQRTISRAVPLDQSPSGRLYQRSLNSVLEYSRPTMNIRSSWSHWSSS
FT                   PRPLPPPQVPSLMSWTPIANIAPSNPRLINSESPRMDQGVGAQSLSTGRNGTTHPRTNF
FT                   ESFTKETGPRRLRARSGSPSSARSRTRN"
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SQ   Sequence 600 BP; 160 A; 158 C; 161 G; 121 T; 0 other;

hq543091 Length: 600  28-JAN-2013  Type: N  Check: 6612  ..

       1  atgaatacgg gtgcggctag aaatcatggc atggggagac gcagacggcg
      51  caacagacgc gttacgaggc gtcagcgagt ggttgtggtc caagcccctg
     101  ggctaccacg ccgcggaaga cgacaacgac gaaaccgccg acgcgcttct
     151  cgaggaggca gagctggagg aggacgctcg agcgaaacat ttgtgttatc
     201  aaaggacaat ctcgcgggca gttcctctgg atcaatcacc ttcgggccgt
     251  ctctatcaga gaagcctgaa ttcagttctg gaatactcaa ggcctaccat
     301  gaatataaga tcatcatggt cacattggag ttcatctccg aggcctctgc
     351  cacctcctca ggttccatcg cttatgagct ggacccccat tgcaaatata
     401  gctccctcca atcctcgatt aataaattcg gaatcaccaa gaatggatca
     451  aggagttgga gctcaaagtt tatcaacggg gaggaatggc acgacgcatc
     501  cgaggaccaa tttcgaatcc tttacaaagg aaacggggcc tcgtcgattg
     551  cgggctcgtt caggatcacc ttcaagtgcc aggtccagaa cccgaaatag