Sequence of DPV Cucurbit aphid-borne yellows virus

Cucurbit aphid-borne yellows virus-like isolate 22pCP coat protein gene, complete cds; and movement protein gene, partial cds.

ACC No: HQ543092

Dated: 2013-01-28 | Length: 600 | CRC: -1481093060

                
ID   HQ543092; SV 1; linear; genomic RNA; STD; VRL; 600 BP.
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AC   HQ543092;
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DT   13-JUN-2011 (Rel. 109, Created)
DT   28-JAN-2013 (Rel. 115, Last updated, Version 2)
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DE   Cucurbit aphid-borne yellows virus-like isolate 22pCP coat protein gene,
DE   complete cds; and movement protein gene, partial cds.
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KW   .
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OS   Cucurbit aphid-borne yellows virus-like
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   unclassified Luteoviridae.
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RN   [1]
RP   1-600
RA   Dann A.L., Wilson C.R.;
RT   "Molecular survey of Poleroviruses (Luteoviridae) infecting peas (Pisum
RT   sativum L.) and broccoli (Brassica oleracea var. italica) in Tasmania";
RL   Unpublished.
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RN   [2]
RP   1-600
RA   Dann A.L., Wilson C.R.;
RT   ;
RL   Submitted (05-NOV-2010) to the INSDC.
RL   Tasmanian Institute of Agricultural Research, University of Tasmania, 13 St
RL   Johns Avenue, New Town, Tasmania 7008, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .600
FT                   /organism="Cucurbit aphid-borne yellows virus-like"
FT                   /host="Pisum sativum"
FT                   /isolate="22pCP"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collected_by="Susan Lambert"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:1286610"
FT   CDS             1. .600
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="P3"
FT                   /db_xref="GOA:F8S7Y7"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:F8S7Y7"
FT                   /protein_id="AEH27579.1"
FT                   /translation="MNTGAARNHGMGRRRRRNKRVTRRQRVVVVPAPGVPGRRRKQRRN
FT                   RRRASRGGRAGGGRSSETFVLSKDNLAGSSSGSITFGPSLSEKPEFSSGILKAYHEYKI
FT                   IMVTLEFISEASATSSGSIAYELDPHCKYSSLHSSINKFGITKNGSRSWSSKFINGEEW
FT                   HDASEDQFRILYQGNGASSIAGSFRITFKCLVQNPK"
FT   CDS             26. .>600
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="P4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:F8S7Y8"
FT                   /protein_id="AEH27580.1"
FT                   /translation="MAWGDADGATNALQGVSEWLWSQPLVYRAAEENSDETADALLEEA
FT                   ELEEDARAKHLCYQRTISRAVPLDQSPSGRLYQRSLNSVLEYSRPTMNIRSSWSHWSSS
FT                   PRPLPPPQVPSLMSWTPIANIAPSTPRLINSESPRMDPGVGALSLSTARNGTTHPRTSF
FT                   ESFTKETGPRRLRARSGSPSSAWSRTRN"
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SQ   Sequence 600 BP; 156 A; 160 C; 160 G; 124 T; 0 other;

hq543092 Length: 600  28-JAN-2013  Type: N  Check: 8339  ..

       1  atgaatacgg gtgcggctag aaatcatggc atggggagac gcagacggcg
      51  caacaaacgc gttacaaggc gtcagcgagt ggttgtggtc ccagcccctg
     101  gtgtaccggg ccgcagaaga aaacagcgac gaaaccgccg acgcgcttct
     151  cgaggaggca gagctggagg aggacgctcg agcgaaacat ttgtgttatc
     201  aaaggacaat ctcgcgggca gttcctctgg atcaatcacc ttcgggccgt
     251  ctctatcaga gaagcctgaa ttcagttctg gaatactcaa ggcctaccat
     301  gaatataaga tcatcatggt cacattggag ttcatctccg aggcctctgc
     351  cacctcctca ggttccatcg cttatgagct ggacccccat tgcaaatata
     401  gctccctcca ctcctcgatt aataaattcg gaatcaccaa gaatggatcc
     451  aggagttgga gctctaagtt tatcaacggc gaggaatggc acgacgcatc
     501  cgaggaccag tttcgaatcc tttaccaagg aaacggggcc tcgtcgattg
     551  cgggctcgtt caggatcacc ttcaagtgcc tggtccagaa cccgaaatag