Sequence of DPV Beet western yellows virus

Beet western yellows virus isolate 40bCP coat protein gene, partial cds; and movement protein gene, complete cds.

ACC No: HQ543100

Dated: 2013-01-28 | Length: 564 | CRC: -337145773

                
ID   HQ543100; SV 1; linear; genomic RNA; STD; VRL; 564 BP.
XX
AC   HQ543100;
XX
DT   13-JUN-2011 (Rel. 109, Created)
DT   28-JAN-2013 (Rel. 115, Last updated, Version 2)
XX
DE   Beet western yellows virus isolate 40bCP coat protein gene, partial cds;
DE   and movement protein gene, complete cds.
XX
KW   .
XX
OS   Beet western yellows virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Polerovirus.
XX
RN   [1]
RP   1-564
RA   Dann A.L., Wilson C.R.;
RT   "Molecular survey of Poleroviruses (Luteoviridae) infecting peas (Pisum
RT   sativum L.) and broccoli (Brassica oleracea var. italica) in Tasmania";
RL   Unpublished.
XX
RN   [2]
RP   1-564
RA   Dann A.L., Wilson C.R.;
RT   ;
RL   Submitted (05-NOV-2010) to the INSDC.
RL   Tasmanian Institute of Agricultural Research, University of Tasmania, 13 St
RL   Johns Avenue, New Town, Tasmania 7008, Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .564
FT                   /organism="Beet western yellows virus"
FT                   /host="Brassica oleracea var. italica"
FT                   /isolate="40bCP"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collected_by="Susan Lambert"
FT                   /collection_date="21-Apr-2010"
FT                   /db_xref="taxon:12042"
FT   CDS             1. .>564
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="P3"
FT                   /db_xref="GOA:F8S803"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:F8S803"
FT                   /protein_id="AEH27595.1"
FT                   /translation="MNTVVGRRTINGRSRPRRQARRAQRSQPVVVVQTSRTTQRRPRRR
FT                   RRGNNRTRGAVSTRGASSSETFVFSKDNLAGSSSGAITFGPSLSNCPAFSNGILKAYHE
FT                   YKISMVILEFVSEASSQNSGSIAYELDPHCKLNSLSSTINKFGITKPGRRAFTASYING
FT                   TEWHDVAEDQFRILYKGNGSSSIAG"
FT   CDS             32. .559
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="P4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:F8S804"
FT                   /protein_id="AEH27596.1"
FT                   /translation="MGEADHAGKHDALSALSQWLWSKPLGQHNADLDDDEEVITGQEEL
FT                   FLPEEQAQARHLFSRKTISREVPAEQSRSGRVYQTAQHSLMEYSRPTMSIKSRWSFWSS
FT                   SPKPLPKTPVPSLTSWTHTVNSTPFPQLSTNSGSQSPGGGRLQRLTSTGRNGTTLPRTN
FT                   SGSSTKAMVLHR"
XX
SQ   Sequence 564 BP; 159 A; 152 C; 139 G; 114 T; 0 other;

hq543100 Length: 564  28-JAN-2013  Type: N  Check: 127  ..

       1  atgaatacgg tcgtgggtag gagaacaatc aatgggagaa gccgaccacg
      51  caggcaagca cgacgcgctc agcgctctca gccagtggtt gtggtccaaa
     101  cctctcggac aacacaacgc cgacctagac gacgacgaag aggtaataac
     151  cggacaagag gagctgtttc taccagagga gcaagctcaa gcgagacatt
     201  tgttttctcg aaagacaatc tcgcgggaag ttccagcgga gcaatcacgt
     251  tcgggccgag tctatcaaac tgcccagcat tctctaatgg aatactcaag
     301  gcctaccatg agtataaaat ctcgatggtc attttggagt tcgtctccga
     351  agcctcttcc caaaactccg gttccatcgc ttacgagctg gacccacact
     401  gtaaactcaa ctccctttcc tcaactatca acaaattcgg gatcacaaag
     451  cccgggagga gggcgtttac agcgtcttac atcaacggga cggaatggca
     501  cgacgttgcc gaggaccaat tcaggatcct ctacaaaggc aatggttctt
     551  catcgatagc tgga