Sequence of DPV Turnip yellows virus

Turnip yellows virus clone pTTuP0CBp-6 P0 gene, complete cds.

ACC No: HQ602646

Dated: 2011-10-02 | Length: 750 | CRC: -593241596

                
ID   HQ602646; SV 1; linear; genomic RNA; STD; VRL; 750 BP.
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AC   HQ602646;
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DT   02-OCT-2011 (Rel. 110, Created)
DT   02-OCT-2011 (Rel. 110, Last updated, Version 1)
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DE   Turnip yellows virus clone pTTuP0CBp-6 P0 gene, complete cds.
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KW   .
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OS   Turnip yellows virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Polerovirus.
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RN   [1]
RP   1-750
RA   Xiang H.Y., Dong S.W., Shang Q.X., Han C.G., Li D.W., Yu J.L.;
RT   "Molecular characterization of a polerovirus infecting cruciferous crops in
RT   China with two genotypes";
RL   Unpublished.
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RN   [2]
RP   1-750
RA   Han C.G.;
RT   ;
RL   Submitted (25-OCT-2010) to the INSDC.
RL   Plant Pathology, China Agricultural University, No. 2 Yuanmingyuan West
RL   Road, Haidian District, Beijing 100193, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .750
FT                   /organism="Turnip yellows virus"
FT                   /host="Brassica pekinensis"
FT                   /isolate="Beijing"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="10-Oct-2010"
FT                   /clone="pTTuP0CBp-6"
FT                   /db_xref="taxon:131083"
FT   CDS             1. .750
FT                   /codon_start=1
FT                   /product="P0"
FT                   /note="ORF0"
FT                   /protein_id="ADZ23993.1"
FT                   /translation="MQFVAHDDLHTLEVRKVRYLHPRQVKFLLAGLLLNIEPFVRAIQE
FT                   RNNEFKTDVFLRSLLYQLPLYLGDHIHDDVRVSVLVAEPELCAWFSLQTGYAPASTSGR
FT                   VDTHVPGTKTSRRRIIQRSLASDFSDKFKRFPECLFVSLEHFQRLLSIWTKDAEERLFS
FT                   GCREISVGSHTLVELANLGELIRVMVVGGEFHNPRLLSRLAVHCYKIYGEDGFISFWRI
FT                   ANLDYLDCFLTPEEILFSSSVYTEMFV"
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SQ   Sequence 750 BP; 180 A; 187 C; 152 G; 231 T; 0 other;

hq602646 Length: 750  02-OCT-2011  Type: N  Check: 7378  ..

       1  atgcaatttg ttgctcacga cgacttacac actttagaag taagaaaagt
      51  cagatacctc catccgcgac aagtaaagtt tcttttagct ggcctattgc
     101  ttaacatcga accatttgta agagcaatcc aagagcgcaa taatgaattc
     151  aaaactgatg ttttccttcg ctctcttctt taccagcttc ctctatacct
     201  cggagaccac atccacgatg atgttcgagt ttccgtactt gttgccgaac
     251  cagagctatg tgcctggttt tcattacaaa cgggatacgc tcccgcctcc
     301  acctcaggcc gtgttgacac acacgtgccc ggaaccaaga cctctcgtag
     351  aagaatcata caacgatctc ttgcgagcga tttctcagat aagttcaagc
     401  gatttccaga atgtttattc gttagccttg aacatttcca gcgacttcta
     451  tcaatctgga ctaaagacgc tgaagagcgc ctcttttctg gctgtcgaga
     501  aatttctgtg gggtctcaca cgcttgtgga gctcgctaat cttggcgagc
     551  ttatccgcgt tatggtggtt ggcggtgaat ttcacaaccc ccgtcttctg
     601  tctcgccttg ctgtacactg ttacaagatt tatggtgaag acggtttcat
     651  ttctttttgg aggattgcca atctggatta tctcgattgt tttctcactc
     701  ctgaagaaat ccttttcagc tcttcggtct acaccgaaat gtttgtatga