Sequence of DPV Tomato leaf curl New Delhi virus

Tomato leaf curl New Delhi virus coat protein (AV1) gene, complete cds.

ACC No: HQ840736

Dated: 2011-05-31 | Length: 771 | CRC: -23378966

                
ID   HQ840736; SV 1; linear; genomic DNA; STD; VRL; 771 BP.
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AC   HQ840736;
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DT   31-MAY-2011 (Rel. 109, Created)
DT   31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE   Tomato leaf curl New Delhi virus coat protein (AV1) gene, complete cds.
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KW   .
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OS   Tomato leaf curl New Delhi virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-771
RA   Raj S.K., Snehi S.K.;
RT   "Tomato leaf curl New Delhi virus isolate associated with yellow mosaic
RT   disease on Coccinia indica in India";
RL   Unpublished.
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RN   [2]
RP   1-771
RA   Raj S.K., Snehi S.K.;
RT   ;
RL   Submitted (30-DEC-2010) to the INSDC.
RL   Plant Molecular Virology, National Botanical Research Institute, Rana
RL   Pratap Marg, Lucknow, U.P. 226001, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /organism="Tomato leaf curl New Delhi virus"
FT                   /segment="DNA-A"
FT                   /host="Coccinia grandis"
FT                   /isolate="Lucknow"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /collection_date="Nov-2010"
FT                   /db_xref="taxon:223347"
FT   gene            1. .771
FT                   /gene="AV1"
FT   CDS             1. .771
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /protein_id="AEF65940.1"
FT                   /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP
FT                   STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH
FT                   SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
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SQ   Sequence 771 BP; 228 A; 158 C; 187 G; 198 T; 0 other;

hq840736 Length: 771  31-MAY-2011  Type: N  Check: 582  ..

       1  atggcgaagc gaccagcaga tatcatcatt tcaacgcccg catcgaaggt
      51  acgccgacgt ctcaacttcg acagccccta tggagctcgt gcagttgtcc
     101  ccattgcccg cgtcacaaaa gcaaaggcct ggaccaacag gccgatgaac
     151  agaaaaccca gaatgtacag aatgtataga agtcccgacg tgccaagggg
     201  ctgtgaaggc ccttgcaagg tgcagtcctt tgaatctagg cacgatgtct
     251  ctcatattgg taaagtcatg tgcgttagtg atgttactcg aggaactgga
     301  ctcacacatc gcgtagggaa gcgattttgt gtgaaatctg tctatgtgct
     351  ggggaagata tggatggatg aaaacatcaa gacaaaaaac catactaaca
     401  gtgtcatgtt ttttttggtc cgtgaccgtc gtcctacagg atcccctcaa
     451  gattttgggg aagtttttaa catgtttgac aatgaaccga gcacagcaac
     501  ggtgaagaac atgcatcgtg atcgttatca agtcttacgg aaatggcatg
     551  cgactgtgac gggaggaaca tatgcatcta gggagcaagc attagttagg
     601  aagtttgtta gggttaataa ttatgtagtt tacaatcaac aagaggccgg
     651  caagtatgag aatcattctg aaaatgcatt aatgttgtat atggcctgta
     701  ctcatgcatc aaatcctgta tatgctactt tgaaaatccg gatctatttc
     751  tatgattcgg taacaaatta a