Sequence of DPV Influenza B virus

Influenza B/lee/40, neuraminidase & nb (seg 6) rna.

ACC No: J02095

Dated: 2000-03-04 | Length: 1557 | CRC: -791623795

                !!NA_SEQUENCE 1.0
ID   ORBL40NA   standard; RNA; VRL; 1557 BP.
XX
AC   J02095;
XX
SV   J02095.1
XX
DT   13-JUN-1985 (Rel. 06, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Influenza B/lee/40, neuraminidase & nb (seg 6) rna.
XX
KW   glycoprotein; neuraminidase; overlapping genes; subgenome;
KW   unidentified reading frame.
XX
OS   Influenzavirus B
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae.
XX
RN   [1]
RP   1-1557
RX   MEDLINE; 83091050.
RA   Shaw M.W., Lamb R.A., Erickson B.W., Briedis D.J., Choppin P.W.;
RT   "complete nucleotide sequence of the neuraminidase gene of influenza b
RT   virus";
RL   Proc. Natl. Acad. Sci. U.S.A. 79:6817-6821(1982).
XX
RN   [2]
RP   1-358
RX   MEDLINE; 83273716.
RA   Shaw M.W., Choppin P.W., Lamb R.A.;
RT   "a previously unrecognized influenza b virus glycoprotein from a
RT   bicistronic mrna that also encodes the viral neuraminidase";
RL   Proc. Natl. Acad. Sci. U.S.A. 80:4879-4883(1983).
XX
DR   SWISS-PROT; P03474; NRAM_INBLE.
DR   SWISS-PROT; P06817; VNB_INBLE.
XX
CC   Sequence flanked on 5' end by cellular 'cap transfer' DNA
CC   (AGACACACGC). Neuraminidase cds determined by consideration of open
CC   reading frames, and mw and composition of the protein product. The
CC   second open reading frame codes for a protein (nb) found only in
CC   type b influenzas Its functional significance is not yet known.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1557
FT                   /db_xref="taxon:11520"
FT                   /organism="Influenzavirus B"
FT   CDS             47. .349
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:P06817"
FT                   /note="nb"
FT                   /protein_id="AAA43748.1"
FT                   /translation="MNNATFNCTNINPITHIRGSIIITICVSLIVILIVFGCIAKIFIN
FT                   KNNCTNNVIRVHKRIKCPDCEPFCNKRDDISTPRAGVDIPSFILPGLNLSEGTPN"
FT   CDS             54. .1454
FT                   /codon_start=1
FT                   /db_xref="SWISS-PROT:P03474"
FT                   /note="neuraminidase"
FT                   /protein_id="AAA43749.1"
FT                   /translation="MLPSTVQTLTLLLTSGGVLLSLYVSASLSYLLYSDVLLKFSSTKT
FT                   TAPTMSLECTNASNAQTVNHSATKEMTFPPPEPEWTYPRLSCQGSTFQKALLISPHRFG
FT                   EIKGNSAPLIIREPFVACGPKECRHFALTHYAAQPGGYYNGTRKDRNKLRHLVSVKLGK
FT                   IPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDNDALVKIKYGEAYTDTYHSYAHNIL
FT                   RTQESACNCIGGDCYLMITDGSASGISKCRFLKIREGRIIKEILPTGRVEHTEECTCGF
FT                   ASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTKTYLDTPRPDDGSIAGPCESN
FT                   GDKWLGGIKGGFVHQRMASKIGRWYSRTMSKTNRMGMELYVKYDGDPWTDSDALTLSGV
FT                   MVSIEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKDTWHSAATAIYCLMGSGQLLWDT
FT                   VTGVDMAL"
XX
SQ   Sequence 1557 BP; 511 A; 301 C; 346 G; 399 T; 0 other;

J02095  Length: 1557  September 18, 2002 10:52  Type: N  Check: 7599  ..

       1  agcagaagca gagcatattc ttagaactga agtgaacagg ccaaaaatga
      51  acaatgctac cttcaactgt acaaacatta accctattac tcacatcagg
     101  gggagtatta ttatcactat atgtgtcagc ctcattgtca tacttattgt
     151  attcggatgt attgctaaaa ttttcatcaa caaaaacaac tgcaccaaca
     201  atgtcattag agtgcacaaa cgcatcaaat gcccagactg tgaaccattc
     251  tgcaacaaaa gagatgacat ttccaccccc agagccggag tggacatacc
     301  ctcgtttatc ttgccagggc tcaacctttc agaaggcact cctaattagc
     351  cctcataggt tcggagagat caaaggaaac tcagctccct tgataataag
     401  agaacctttt gttgcttgtg gaccaaaaga atgcagacac tttgctctga
     451  cccattatgc agctcagccg gggggatact acaatggaac aagaaaggac
     501  agaaacaagc tgaggcatct agtatcagtc aaattgggaa aaatcccaac
     551  tgtggaaaac tccattttcc acatggcagc ttggagcgga tccgcatgcc
     601  atgatggtag agaatggaca tatatcggag ttgatggtcc tgacaatgat
     651  gcattggtca aaataaaata tggagaagca tatactgaca catatcattc
     701  ctatgcacac aacatcctaa gaacacaaga aagtgcctgc aattgcatcg
     751  ggggagattg ttatcttatg ataacagacg gctcagcttc aggaattagt
     801  aaatgcagat ttcttaaaat tagagagggt cgaataataa aagaaatact
     851  tccaacagga agagtggagc acactgaaga gtgcacatgc gggttcgcca
     901  gcaataaaac catagaatgt gcctgtagag acaacagtta cacagcaaaa
     951  agaccctttg tcaaattaaa tgtggaaact gatacagctg aaataagatt
    1001  gatgtgcaca aagacttatc tagacactcc cagaccggat gatggaagca
    1051  tagcagggcc ttgcgaatct aatggagaca agtggcttgg aggcatcaaa
    1101  ggaggattcg tccatcaaag aatggcatct aagattggaa gatggtactc
    1151  ccgaacgatg tctaaaacta acagaatggg gatggaactg tatgtaaagt
    1201  atgatggtga cccatggact gacagtgatg ctcttactct tagtggagta
    1251  atggtttcca tagaagaacc tggttggtat tcttttggct tcgaaataaa
    1301  ggacaagaaa tgtgatgtcc cttgtattgg gatagagatg gtacacgatg
    1351  gtggaaaaga tacttggcat tcagctgcaa cagccattta ctgtttgatg
    1401  ggctcaggac aattgctatg ggacactgtc acaggcgttg atatggcttt
    1451  ataatagagg aatggttgga tctgttctaa accctttgtt cctattttat
    1501  ttgaacagtt gttcttacta gatttaattg tttctgaaaa atgctcttgt
    1551  tactact