Sequence of DPV Influenza A virus
Influenza A/Puerto Rico/8/34(Cambridge) (H1N1), neuraminidase (seg 6 of complete genome).
ACC No: J02146
Dated: 2000-03-04 | Length: 1413 | CRC: 1045445704
!!NA_SEQUENCE 1.0
ID ORP834NA standard; RNA; VRL; 1413 BP.
XX
AC J02146;
XX
SV J02146.1
XX
DT 13-JUN-1985 (Rel. 06, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 4)
XX
DE Influenza A/Puerto Rico/8/34(Cambridge) (H1N1), neuraminidase (seg 6 of
DE complete genome).
XX
KW complete genome; glycoprotein; neuraminidase.
XX
OS Influenzavirus A
OC Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
OC Influenza A viruses.
XX
RN [1]
RP 1-206
RX MEDLINE; 81080986.
RA Blok J., Air G.M.;
RT "comparative nucleotide sequences at the 3' end of the neuraminidase gene
RT from eleven influenza type a viruses";
RL Virology 107:50-60(1980).
XX
RN [2]
RP 1-1413
RX MEDLINE; 81148841.
RA Fields S., Winter G., Brownlee G.G.;
RT "structure of the neuraminidase gene in human influenza virus A/PR/8/34";
RL Nature 290:213-217(1981).
XX
RN [3]
RP 141-233
RX MEDLINE; 82201010.
RA Blok J., Air G.M.;
RT "Block deletions in the neuraminidase genes from some influenza A viruses
RT of the N1 subtype";
RL Virology 118:229-234(1982).
XX
DR SWISS-PROT; P03468; NRAM_IAPUE.
XX
CC [2],[1] sequence determined either by analysis of cloned cdna
CC fragments [2] or by analysis of cdna synthesized with either
CC poly-adenylated vrna template or vrna template and dodecamer primer
CC [1]. assignment of coding region by consideration of open reading
CC frames. [3] compares this na sequence with 11 other influenza
CC strains and finds that the strains collected from 1933-1935 have
CC deletions of 33 to 48bp in their seg 6 vrna 3' ends. the sequence
CC figure for [3] was unclear at the extreme 3' end (bases 228-233).
CC Complete source information:
CC influenza A/Puerto Rico/8/34 [2]: rna & cdna to rna from human;
CC [1],[3]: cdna to rna grown in chicken embryos, originally from
CC human. [3] specifies A/Puerto Rico/8/34(mt. sinai).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1413
FT /db_xref="taxon:11320"
FT /organism="Influenzavirus A"
FT CDS 21. .1385
FT /codon_start=1
FT /db_xref="SWISS-PROT:P03468"
FT /note="neuraminidase"
FT /protein_id="AAA43412.1"
FT /translation="MNPNQKIITIGSICLVVGLISLILQIGNIISIWISHSIQTGSQNH
FT TGICNQNIITYKNSTWVKDTTSVILTGNSSLCPIRGWAIYSKDNSIRIGSKGDVFVIRE
FT PFISCSHLECRTFFLTQGALLNDRHSNGTVKDRSPYRALMSCPVGEAPSPYNSRFESVA
FT WSASACHDGMGWLTIGISGPDNGAVAVLKYNGIITETIKSWRKKILRTQESECACVNGS
FT CFTIMTDGPSDGLASYKIFKIEKGKVTKSIELNAPNSHYEECSCYPDTGKVMCVCRDNW
FT HGSNRPWVSFDQNLDYQIGYICSGVFGDNPRPKDGTGSCGPVYVDGANGVKGFSYRYGN
FT GVWIGRTKSHSSRHGFEMIWDPNGWTETDSKFSVRQDVVAMTDWSGYSGSFVQHPELTG
FT LDCIRPCFWVELIRGRPKEKTIWTSASSISFCGVNSDTVDWSWPDGAELPFTIDK"
XX
SQ Sequence 1413 BP; 428 A; 253 C; 351 G; 381 T; 0 other;
J02146 Length: 1413 September 18, 2002 10:52 Type: N Check: 4786 ..
1 agcgaaagca ggggtttaaa atgaatccaa atcagaaaat aataaccatt
51 ggatcaatct gtctggtagt cggactaatt agcctaatat tgcaaatagg
101 gaatataatc tcaatatgga ttagccattc aattcaaact ggaagtcaaa
151 accatactgg aatatgcaac caaaacatca ttacctataa aaatagcacc
201 tgggtaaagg acacaacttc agtgatatta accggcaatt catctctttg
251 tcccatccgt gggtgggcta tatacagcaa agacaatagc ataagaattg
301 gttccaaagg agacgttttt gtcataagag agccctttat ttcatgttct
351 cacttggaat gcaggacctt ttttctgacc caaggtgcct tactgaatga
401 caggcattca aatgggactg ttaaggacag aagcccttat agggccttaa
451 tgagctgccc tgtcggtgaa gctccgtccc cgtacaattc aagatttgaa
501 tcggttgctt ggtcagcaag tgcatgtcat gatggcatgg gctggctaac
551 aatcggaatt tcaggtccag ataatggagc agtggctgta ttaaaataca
601 acggcataat aactgaaacc ataaaaagtt ggaggaagaa aatattgagg
651 acacaagagt ctgaatgtgc ctgtgtaaat ggttcatgtt ttactataat
701 gactgatggc ccgagtgatg ggctggcctc gtacaaaatt ttcaagatcg
751 aaaaggggaa ggttactaaa tcaatagagt tgaatgcacc taattctcac
801 tatgaggaat gttcctgtta ccctgatacc ggcaaagtga tgtgtgtgtg
851 cagagacaat tggcatggtt cgaaccggcc atgggtgtct ttcgatcaaa
901 acctggatta tcaaatagga tacatctgca gtggggtttt cggtgacaac
951 ccgcgtccca aagatggaac aggcagctgt ggtccagtgt atgttgatgg
1001 agcaaacgga gtaaagggat tttcatatag gtatggtaat ggtgtttgga
1051 taggaaggac caaaagtcac agttccagac atgggtttga gatgatttgg
1101 gatcctaatg gatggacaga gactgatagt aagttctctg tgaggcaaga
1151 tgttgtggca atgactgatt ggtcagggta tagcgggagt ttcgttcaac
1201 atcctgagct aacagggcta gactgtataa ggccgtgctt ctgggttgaa
1251 ttaatcaggg gacgacctaa agaaaaaaca atctggacta gtgcgagcag
1301 catttctttt tgtggcgtga atagtgatac tgtagattgg tcttggccag
1351 acggtgctga gttgccattc accattgaca agtagtctgt tcaaaaaact
1401 ccttgtttct act