Sequence of DPV Influenza A virus
Influenza A/Puerto Rico/8/34(Cambridge) (H1N1), nonstructural protein (seg 8 of complete genome).
ACC No: J02150
Dated: 2000-03-04 | Length: 890 | CRC: -1290863917
!!NA_SEQUENCE 1.0
ID FLANSMCB standard; RNA; VRL; 890 BP.
XX
AC J02150;
XX
SV J02150.1
XX
DT 13-JAN-1992 (Rel. 30, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE Influenza A/Puerto Rico/8/34(Cambridge) (H1N1), nonstructural protein (seg
DE 8 of complete genome).
XX
KW complete genome.
XX
OS Influenzavirus A
OC Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
OC Influenza A viruses.
XX
RN [1]
RP 1-890
RX MEDLINE; 81124304.
RA Baez M., Taussig R., Zazra J.J., Young J.F., Palese P., Reisfeld A.,
RA Skalka A.M.;
RT "Complete nucleotide sequence of the influenza A/PR/8/34 virus NS gene and
RT comparison with the NS genes from the A/Udorn/72 and A/FPV/Rostock/34
RT strains";
RL Nucleic Acids Res. 8:5845-5858(1980).
XX
RN [2]
RP 6-131
RX MEDLINE; 80215356.
RA Air G.M., Hackett J.A.;
RT "Gene 8 of influenza virus: sequences of cDNA transcribed from the 3' ends
RT of viral RNA of influenza A and B strains";
RL Virology 103:291-298(1980).
XX
RN [3]
RP 1-247
RX MEDLINE; 81218398.
RA Hall R.M., Air G.M.;
RT "Variation in nucleotide sequences coding for the n-terminal regions of the
RT matrix and nonstructural proteins of influenza a viruses";
RL J. Virol. 38:1-7(1981).
XX
RN [4]
RP 1-890
RX MEDLINE; 81150463.
RA Winter G., Fields S., Gait M.J., Brownlee G.G.;
RT "the use of synthetic oligodeoxynucleotide primers in cloning and
RT sequencing segment 8 of influenza virus (a/PR/8/34)";
RL Nucleic Acids Res. 9:237-245(1981).
XX
DR SPTREMBL; Q67266; Q67266.
DR SPTREMBL; Q67267; Q67267.
XX
CC ns1 cds and ns2 cds and ivs regions assigned by consideration of
CC open reading frames and comparison to A/udorn/72. [1] compared with
CC NBRF data.
XX
FH Key Location/Qualifiers
FH
FT source 1. .890
FT /db_xref="taxon:11320"
FT /organism="Influenzavirus A"
FT CDS 27. .719
FT /codon_start=1
FT /db_xref="SPTREMBL:Q67267"
FT /note="nonstructural protein ns1"
FT /protein_id="AAA43536.1"
FT /translation="MDPNTVSSFQVDCFLWHVRKRVADQELGDAPFLDRLRRDQKSLRG
FT RGSTLGLDIETATRAGKQIVERILKEESDEALKMTMASVPASRYLTDMTLEEMSREWSM
FT LIPKQKVAGPLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPL
FT PSLPGHTAEDVKNAVGVLIGGLEWNDNTVRVSETLQRFAWRSSNENGRPPLTPKQKREM
FT AGTIRSEV"
FT exon <27. .56
FT /note="nonstructural protein ns2"
FT /number=1
FT CDS join(27. .56,529. .864)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q67266"
FT /note="nonstructural protein ns2"
FT /protein_id="AAA43535.1"
FT /translation="MDPNTVSSFQDILLRMSKMQLESSSEDLNGMITQFESLKLYRDSL
FT GEAVMRMGDLHSLQNRNEKWREQLGQKFEEIRWLIEEVRHKLKVTENSFEQITFMQALH
FT LLLEVEQEIRTFSFQLI"
FT intron 57. .528
FT /note="ns2 intron"
FT exon 529. .>864
FT /note="nonstructural protein ns2"
FT /number=2
XX
SQ Sequence 890 BP; 285 A; 179 C; 215 G; 211 T; 0 other;
J02150 Length: 890 September 18, 2002 10:52 Type: N Check: 3870 ..
1 agcaaaagca gggtgacaaa gacataatgg atccaaacac tgtgtcaagc
51 tttcaggtag attgctttct ttggcatgtc cgcaaacgag ttgcagacca
101 agaactaggt gatgccccat tccttgatcg gcttcgccga gatcagaaat
151 ccctaagagg aaggggcagc actcttggtc tggacatcga gacagccaca
201 cgtgctggaa agcagatagt ggagcggatt ctgaaagaag aatccgatga
251 ggcacttaaa atgaccatgg cctctgtacc tgcgtcgcgt tacctaaccg
301 acatgactct tgaggaaatg tcaagggaat ggtccatgct catacccaag
351 cagaaagtgg caggccctct ttgtatcaga atggaccagg cgatcatgga
401 taaaaacatc atactgaaag cgaacttcag tgtgattttt gaccggctgg
451 agactctaat attgctaagg gctttcaccg aagagggagc aattgttggc
501 gaaatttcac cattgccttc tcttccagga catactgctg aggatgtcaa
551 aaatgcagtt ggagtcctca tcggaggact tgaatggaat gataacacag
601 ttcgagtctc tgaaactcta cagagattcg cttggagaag cagtaatgag
651 aatgggagac ctccactcac tccaaaacag aaacgagaaa tggcgggaac
701 aattaggtca gaagtttgaa gaaataagat ggttgattga agaagtgaga
751 cacaaactga aggtaacaga gaatagtttt gagcaaataa catttatgca
801 agccttacat ctattgcttg aagtggagca agagataaga actttctcat
851 ttcagcttat ttaataataa aaaacaccct tgtttctact