Sequence of DPV Tacaribe virus
Tacaribe virus L protein and P-11 protein genes, complete cds.
ACC No: J04340
Dated: 2000-03-04 | Length: 7102 | CRC: 984674775
!!NA_SEQUENCE 1.0
ID TACLSEG standard; RNA; VRL; 7102 BP.
XX
AC J04340; M33513;
XX
SV J04340.1
XX
DT 23-NOV-1989 (Rel. 21, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE Tacaribe virus L protein and P-11 protein genes, complete cds.
XX
KW L protein; P-11 gene.
XX
OS Tacaribe virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC 2-Tacaribe complex.
XX
RN [1]
RP 420-7102
RX MEDLINE; 89243206.
RA Iapalucci S., Lopez R., Rey O., Lopez N., Franze-Fernandez M.T.,
RA Cohen G.N., Lucero M., Ochoa A., Zakin M.M.;
RT "Tacaribe virus L gene encodes a protein of 2210 amino acid residues";
RL Virology 170:40-47(1989).
XX
RN [2]
RP 1-449
RX MEDLINE; 90051092.
RA Iapalucci S., Lopez N., Rey O., Zakin M.M., Cohen G.N.,
RA Franze-Fernandez M.T.;
RT "The 5' region of Tacaribe virus L RNA encodes a protein with a potential
RT metal binding domain";
RL Virology 173:357-361(1989).
XX
DR SPTREMBL; Q88470; Q88470.
DR SWISS-PROT; P20430; RRPO_TACV.
XX
CC Draft entry and computer-readable sequence for [1] kindly submitted
CC by S.Iapalucci, 08-AUG-1989.
XX
FH Key Location/Qualifiers
FH
FT source 1. .7102
FT /db_xref="taxon:11631"
FT /organism="Tacaribe virus"
FT CDS 70. .357
FT /codon_start=1
FT /db_xref="SPTREMBL:Q88470"
FT /note="P-11 protein"
FT /protein_id="AAA47900.1"
FT /translation="MGNCNRTQKPSSSSNNLEKPPQAAEFRRTAEPSLYGRYNCKCCWF
FT ADKNLITCSDHYLCLRCHQIMLRNSELCNICWKPLPTSIRVPLEASAPDL"
FT CDS complement(440. .7072)
FT /codon_start=1
FT /db_xref="SWISS-PROT:P20430"
FT /product="L protein"
FT /protein_id="AAA47901.1"
FT /translation="MDETVSELKDLVRKHIPNRHEFAHQKDAFLSHCHSGSLLQEGFKL
FT LSNLVELESCESHACHLNTCQKYVDVILSDHGIPCPTLPKVIPDGFKLTGKTLILLETF
FT VRVNPEEFERKWKSDMTKLLNLKQDLLRSGITLVPVVDGRTNYSNRFTPEWVVERIRWL
FT LIEILRKSRSSAEIDIEDQEYQRLIHSLSNVRNQSLGFENIECLKRNLLEYDDRLAKSL
FT FVGVKGDVRESVIREELMKLRLWYKKEVFDKNLGKFRITNRSELLNNLIRLGKHEDNTT
FT SDCPFCVNKFMDIIYSLTFTALKRQDREKSNSELDQYVVCPHEKAYLGVLSICNKIKGL
FT KVFNTRRNTLLFLDLIMVNFLDDLFTAKPEALDSLRRSGLILGQMVTLVNDRALDFLEA
FT VKLIKKKIETNVKWVENCSKILRRSQQDIWSQISVWARYPDLSKLISIAQTISSDRPIM
FT RYSAGGNFNTECKHKTFHMMSDAEQVEAFKILSSVSLSLINSMKTSFSSRLLINEKEYS
FT RYFGNVRLRECYQQRFFLTDGLIVILFYQKTGERSGCYSIYTCEDGVLVEKGSFYCDPK
FT RFFLPIFSQEVLVEMCDEMTTWLDFNSDLMVISKEKLRLLLLSILCAPSKRNQVFLQGL
FT RYFLMAYSNQFHHVDLLSKLKVECMSGSEVIVQRLAVDLFQCLLGEGVDSDPYFARRFK
FT YLLNVSYLCHLITKETPDRLTDQIKCFEKFIEPKIDFNCVIVNPSLNGQLTEAQEGMML
FT DGLDKFYSKTLKDCSDTKLPGVSNELLSYCISLFNKGKLKVTGELKNDPFKPNITSTAL
FT DLSSNKSVVVPKLDELGNVLSVYDREKMISSCVSSMAERFKTKGRYNIDPSTLDYLILK
FT NLTGLVSIGSKTQRDCEELSMMFEGLTEEQAEAFNDIKNSVQLAMVKMKDSKSGDVNLS
FT PNQKEGRVKSSTGTLEELWGPFGIMREIRTEVSLHEVKDFDPDVLASDLYKELCDVVYY
FT SSSKPEYFLERPLEVCPLGLLLKNLTTSAYFDEEYFECFKYLLIQGHYDQKLGSYEHRS
FT RSRLGFTNEALRVKDEVRLSMRESNSEAIADKLDRSYFTNAALRNLCFYSDDSPTEFTS
FT ISSNNGNLKFGLSYKEQVGSNRELYVGDLNTKLITRLVEDFAEAVGSSMRYTCLSSEKE
FT FDRAICDMKLAVNNGDLSCSLDHSKWGPTMSPALFLTFLQFLELRTPKERNIINLEPVL
FT NVLRWHLHKVIEVPVNVAEAYCTGNLKRSLGLMGCGSSSVGEEFFHQFMPVQGEIPSHI
FT MSVLDMGQGILHNMSDLYGLITEQFLNYVLDLLYDVIPTSYTSSDDQVTLIKLPCASDD
FT NQVNDEWLEMLCFHEYLSSKLNKFVSPKSVAGTFVAEFKSRFFVMGEETPLLTQFVAAA
FT LHNVKCKTPTQLSETIDTICDQCVANGVSVQIVSKISQRVNQLIKYSGFKETPFGAVEK
FT QDVKDWVDGTRGYRLQRKIESIFSDDEMTGFIRSCAKRVFNDIKRGKVFEENLISLIGR
FT DGDDALVGFLRYSSCSEQDIMRALGFRWVNLSSFGDLRLVLRTKLMTSRRVLEREEVPT
FT LIKTLQSRLSRNFTKGVKKILAESINKSAFQSSVASGFIGFCKSIGSKCVRDGEGGFLY
FT IKDIYTKVKPCLCEVCNMKRGVIYCRPSLEKIEKFSKPILWDYFSLVLTNACEIGEWVF
FT SSVKEPQIPVVLSNRNLFWAVKPRIVRQLEDQLGMNHVLYSIRKNYPKLFDEHLSPFMS
FT DLQVNRTLDGRKLKFLDVCIALDLMNENLGIVSHLLKARDNSVYIVKQSDCAMAHVRQS
FT DYVDKEVGLSPQQVCYNFMVQIILSSMVNPLVMSTSCLKSFFWFNEVLELEDDGQIELG
FT ELTDFTFLVRDQKISRAMFIEDIAMGYVISNLEDVRLYIDKITIGEQPLAPGRHINDLL
FT DLLGNFDDHEDCDLRFLIQVEHSRTSTKYRFKRKMTYSFSVTCVSKVIDLKEASVELQV
FT VDVTQSVSGSGGSHLLLDGVSMIAGLPIFTGQGTFNMASLMMDADLVETNDNLILTDVR
FT FSFGGFLSELSDKYAYTLNGPVDQGEPLVLRDGHFFMGTEKVSTYRVELTGDIIVKAIG
FT ALDDPEDVNALLNQLWPYLKSTAQVMLFQQEDFVLVYDLHRSGLIRSLELIGDWVEFVN
FT FKVAYSKSLKDLVVSDNQGSLRLRGIMCRPLARRNTVEDIE"
XX
SQ Sequence 7102 BP; 2071 A; 1653 C; 1240 G; 2138 T; 0 other;
J04340 Length: 7102 September 18, 2002 10:52 Type: N Check: 2140 ..
1 cgcaccgggg atcctaggcg ttacgtgcac tcttctttat tgggctggat
51 tacacaaaac ttttcaagca tgggcaactg caatcgaact cagaaaccca
101 gttcgtcttc taacaacctc gagaagccac cacaagctgc agaatttaga
151 agaacggcag agcccagtct atatgggagg tacaattgca aatgttgttg
201 gtttgctgac aaaaacttaa tcacctgtag tgaccattat ctttgtctaa
251 gatgtcacca aatcatgctg agaaactcag agctgtgcaa catctgctgg
301 aagcccctgc caacatccat aagagtcccg ctagaggcaa gtgctccgga
351 tctgtaacca acgacaaaca aggtcgctga ccccccgggg ggcccccaag
401 ggggcccccg tgggggtggc ccccggggga gtttgggttc tactcaatgt
451 cctccactgt gtttctccta gctagaggtc tgcacataat gcctctcaac
501 ctcaaggacc cctggttgtc agatacaaca aggtctttca gggacttact
551 gtatgcaacc ttgaagttga caaattcaac ccagtccccg atcaactcca
601 gggacctgat caagccagat ctatgtaaat catagacaag gacaaagtcc
651 tcttgttgga atagcatcac ctgtgcagtt gattttaaat agggccagag
701 ttggttcaac aaagcattca catcttcagg gtcgtccagt gcgccaattg
751 ccttcactat tatatcacca gtcaactcca ctctgtaagt agaaactttc
801 tcagttccca taaaaaagtg gccgtctctt aacaccaatg gctccccttg
851 atcgactggc ccattgagtg tataggcata cttgtcactc aattcagata
901 aaaatccacc aaagctgaat cttacatccg tcagaattag gttgtcattt
951 gtctccacaa gatctgcatc catcatcagg gaagccatat taaaagtgcc
1001 ttgacctgtg aatatcggaa gtcctgcaat catggaaact ccatccaaca
1051 agaggtgact tccccccgac cctgacactg actgcgtcac atccaccacc
1101 tgtaactcta cgcttgcttc tttaagatca atgactttag aaacacatgt
1151 aacactaaat gagtaagtca ttttcctctt aaacctgtac ttagttgatg
1201 ttctagaatg ctccacctgg atcaaaaacc tcaagtcaca atcctcatgg
1251 tcatcaaagt tcccaagaag atccagcaag tcattgatgt gtctccctgg
1301 agccagtggt tgctctccaa ttgtgatttt gtcaatgtac aatctaacat
1351 cttcaagatt tgaaatcaca taacccattg ctatgtcttc aataaacatc
1401 gctctactga tcttctgatc cctaactaag aaggtgaaat ctgttaactc
1451 acccaattca atctgaccat catcttccag ctccaatact tcattaaacc
1501 aaaaaaacga ttttaggcaa gaagttgaca tcactaaagg gttcaccatc
1551 gatgatagga tgatttgaac catgaagttg taacaaacct gttgaggact
1601 cagtccaact tccttatcta cgtaatcaga ctgcctaacg tgtgccatgg
1651 cacagtcgct ctgtttgact atgtagacac tattgtctct ggctttcagt
1701 aggtggctga cgattcctag attctcattc atcaaatcca atgctatgca
1751 aacatctaag aacttcagct tcctcccatc cagtgttctg ttcacttgca
1801 aatcgctcat gaagggagac aagtgctcat caaataattt cgggtaattt
1851 ttccgaatgg aatacaatac atgattcata cccagttgat cttctaattg
1901 acgaacaatt ctaggcttaa cagcccagaa caaattcctg ttacttaaca
1951 ccactggaat ctgtggctct ttcacagatg agaataccca ctcccctatt
2001 tcgcaggcat tggtcaaaac taaagaaaag taatcccaaa gaataggttt
2051 ggaaaatttt tcaatttttt ccagtgaggg tctgcaataa atcacacctc
2101 ttttcatgtt gcacacctca cacagacagg gcttcacctt tgtataaata
2151 tctttaatgt aaaggaaacc gccctcacca tctctgacac atttgctgcc
2201 tatactttta caaaaaccta taaaaccaga tgccactgaa gactggaatg
2251 cagatttgtt tatggactcc gctaagatct ttttaacacc ctttgtgaag
2301 ttccttgaca acctggactg caatgtctta atcagtgttg gcacctcttc
2351 tctctcaaga acccttctgc tcgtcattaa cttggtcctc aatactagtc
2401 ttaggtcacc aaaacttgac aaattcaccc atctaaagcc taaggcacgc
2451 ataatatctt gctctgagca acttgaataa cgcaagaacc ccacaagggc
2501 gtcatcacca tctctaccaa taagactgat caggttttcc tcaaaaactt
2551 tgcctctttt tatatcatta aaaacccttt tagcacagct tctaatgaag
2601 cctgtcatct catcatcaga aaatattgat tcaatcttcc tctgcaatcg
2651 ataacccctc gtcccatcca cccaatcttt tacatcttgt ttctcaacag
2701 caccaaaagg ggtttccttg aagccggagt atttgatcag ctggttcacc
2751 ctttgagaga tctttgagac aatttggaca ctaacaccat ttgcgacaca
2801 ctggtcacag attgtgtcta ttgtttctga caactgtgtt ggtgttttgc
2851 atttcacatt gtgcaacgct gcagcaacaa attgagttaa tagcggggtt
2901 tcttccccca tcacaaaaaa tcttgatttg aattcagcta caaaggtgcc
2951 cgctacactc ttggggctaa caaatttgtt caattttgag gagaggtact
3001 catgaaaaca caacatttcc aaccactcat cattaacttg attatcatct
3051 gaagcacaag gcaatttgat aagtgtgacc tggtcatcgc tagaagtgta
3101 ggaagttgga atgacatcat atagtaaatc tagcacataa tttaagaact
3151 gttctgttat caatccatac aaatcagaca tgttatgcag gatgccttgg
3201 cccatatcta gaacagacat tatgtgactt ggtatctctc cttggactgg
3251 catgaattgg tggaagaatt cctctcccac gcttgagcta ccacaaccca
3301 tcaaccctaa gcttctcttt agattgccag tacagtaagc ctcagcaaca
3351 tttactggaa cttctataac tttatggagg tgccatctca gcacatttaa
3401 gactggttca agattaataa tgttcctttc ttttggggtc ctaagttcca
3451 aaaattggag gaatgtcaag aaaagcgcag gactcatggt tggtccccat
3501 ttagagtgat caagagaaca tgataggtca ccattgttca ctgctaactt
3551 catgtcacag atggctctat caaattcttt ttctgaactg agacatgtat
3601 atctcatgga actgccaact gcctctgcaa agtcttcaac taaccttgtt
3651 atcagcttag tgttaagatc cccaacgtaa agttccctat tggaacccac
3701 ttgctccttg taacttaagc caaactttaa gttaccatta tttgaactga
3751 tactggtaaa ctcagtagga gaatcatcag agtaaaagca caggttcctt
3801 agtgcagcat tggtaaaata actcctatcc aacttatctg ctatagcttc
3851 agaattgctc tctctcatgc taagtcttac ttcatctttc actctcagtg
3901 cttcattagt gaaaccaagc cttgatctac tcctatgttc ataacttcct
3951 agtttttgat cataatgacc ttgtatcaat aagtatttga agcactcaaa
4001 atactcttca tcaaaatatg cagaagtagt gagatttttc aaaagcaatc
4051 ctagaggaca aacttctaaa ggtctctcca agaaatactc tggtttgctt
4101 gaggagtaat agaccacatc acatagttct ttatacaagt ctgaagcgag
4151 tacatcagga tcaaagtctt tcacctcatg aagtgagacc tctgtcctaa
4201 tctctctcat aatcccaaaa ggaccccaaa gttcctcaag tgtacctgtg
4251 ctgcttttaa ccctgccttc cttttgattc ggacttagat tgacatctcc
4301 agatttggag tccttcattt tgaccattgc taattgcacg gaatttttta
4351 tatcattgaa agcttctgct tgctcttctg tcaacccttc aaacatcatt
4401 gacagctctt cacaatctct ctgggtttta gaaccaatac taacaagccc
4451 ggttaagttt tttagtatca agtaatctaa tgtacttgga tcaatgttgt
4501 atcttccctt tgttttgaac ctttccgcca tggaagaaac acatgaagaa
4551 atcatcttct ctctatcata taccgaaaga acattcccaa gttcatctag
4601 ttttggtact actacgctct tattgctaga gaggtctaaa gcagtgctag
4651 taatgtttgg cttgaatggg tcgttcttaa gctcacctgt gacttttagc
4701 tttcctttat taaataatga gatgcaataa ctcaacagtt cattgctgac
4751 ccctggtaat ttggtgtcag aacagtcttt gagggtcttt gaataaaatt
4801 tatccagccc gtccaacatc attccttctt gagcttctgt cagttgacca
4851 tttaaagatg ggttgactat aacacagtta aaatcaattt tgggttcaat
4901 gaatttctca aaacatttga tttggtctgt taatctgtca ggtgtttcct
4951 ttgttattaa atgacaaagg taacttacat ttaagagata cttgaacctc
5001 ctagcaaaat aggggtccga atcaacacct tcaccaagaa ggcattggaa
5051 aaggtccact gccagcctct gaactatgac ttcagagcca gacatacact
5101 ccacttttaa tttggacagt agatccacgt ggtggaattg atttgagtat
5151 gccatcaaaa aataccttag cccttgcaga aatacctgat ttcttttgga
5201 cggggcgcat aaaatgctta acaataaaag tcttagtttc tctttggata
5251 tcaccataag atcactgttg aagtccagcc aagttgtcat ctcatcacac
5301 atctcaacca acacctcttg tgaaaagatt ggcagaaaaa atctcttcgg
5351 gtcacagtaa aaagagccct tctcgacaag aacaccatct tcacatgtgt
5401 aaattgagta gcatcctgaa cgctcacctg tcttttgata aaaaagaata
5451 acaatcagtc catcagttaa aaagaatctc tgttggtagc actcccttag
5501 tctcacattg ccaaaatacc ttgagtattc tttttcatta ataagcaacc
5551 ttgaagaaaa cgaggttttc atagagttta ttaaggaaag agacactgag
5601 gagagtattt tgaaagcctc aacctgttca gcatctgaca tcatgtgaaa
5651 tgtcttatgt ttacattcag tgttaaagtt ccccccagca gagtatctca
5701 taatgggtct atcagaagat attgtctgag ctatagatat tagcttggat
5751 aaatcaggat atcttgccca caccgatatt tgtgaccaga tatcttgttg
5801 agacctcctc aagattttag agcaattctc cacccactta acattcgtct
5851 ctattttctt tttaattaat ttcaccgcct ccaaaaaatc caaggccctg
5901 tcattgacta gtgtgaccat ttgacccagg atgagaccag accttctcaa
5951 agagtccagt gcttcgggtt tggctgtaaa taggtcatct aaaaagttta
6001 ccattatgag atctagaaag agcaacgtat ttcttcgggt gttaaaaact
6051 tttaatccct taattttatt gcaaatcgac aacacgccta aataggcctt
6101 ctcatggggg cagacaacat actgatctaa ttcagagttt gatttctccc
6151 tgtcctgcct ttttagtgct gtgaaagtca aactatagat tatgtccatg
6201 aatttgttga cacaaaaggg acaatctgag gtggtgttat cctcatgttt
6251 ccctaaccta attaaattgt tcagaagctc tgatctatta gttatcctaa
6301 acttccccaa gtttttgtca aaaacttcct ttttgtacca gagtcttaat
6351 ttcattaatt cttccctaat cacagattct cgaacatcgc ctttgactcc
6401 aacaaataat gatttggcca gtctatcatc atactccaaa agatttcttt
6451 tgagacactc tatattctca aatcctaaac tttgattacg aacgtttgaa
6501 agactgtgta tcagacgttg atactcttga tcctcaatat caatctctgc
6551 ggacgatcgg gatttccgca aaatttcaat taacaaccat ctgatcctct
6601 ccaccaccca ttcaggagtg aacctattag aataattagt tctaccgtca
6651 acaacaggaa caagtgtgat gcctgacctc agaaggtctt gtttgagatt
6701 tagtagtttt gtcatgtcac tcttccattt tctctcaaat tcttctggat
6751 tgaccctcac aaatgtttcc aatagtatta atgtttttcc agtgagtttg
6801 aatccatcag gtatcacttt agggagagtg ggacatggga ttccatgatc
6851 actgaggatc acatcaacat atttttggca ggtgttcaag tggcatgcat
6901 gagattcaca ggactctaac tccacaaggt tggagagaag tttaaaacct
6951 tcttgaagca gtgaccctga atgacagtgt gacaggaagg catctttctg
7001 gtgggcaaac tcatgcctat ttggaatgtg ttttctaacc aagtctttga
7051 gttcagacac agtttcatcc atggtcaagt gccgcctagg atccactgtg
7101 cg