Sequence of DPV Eggplant mosaic virus
Eggplant mosaic virus genome.
ACC No: J04374
Dated: 2005-04-17 | Length: 6331 | CRC: -2044222687
!!NA_SEQUENCE 1.0
ID MTYRPVP standard; genomic RNA; VRL; 6331 BP.
XX
AC J04374;
XX
SV J04374.1
XX
DT 26-MAY-1990 (Rel. 24, Created)
DT 17-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE Eggplant mosaic virus genome.
XX
KW replicase protein; virion protein.
XX
OS Eggplant mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymoviridae;
OC Tymovirus.
XX
RN [1]
RP 1-6331
RX MEDLINE; 90021185.
RX PUBMED; 2800336.
RA Osorio-Keese M.E., Keese P., Gibbs A.;
RT "Nucleotide sequence of the genome of eggplant mosaic tymovirus";
RL Virology 172(2):547-554(1989).
XX
FH Key Location/Qualifiers
FH
FT source 1. .6331
FT /db_xref="taxon:12151"
FT /mol_type="genomic RNA"
FT /organism="Eggplant mosaic virus"
FT CDS 102. .2051
FT /codon_start=1
FT /db_xref="GOA:P20129"
FT /db_xref="InterPro:IPR004935"
FT /db_xref="UniProt/Swiss-Prot:P20129"
FT /note="overlapping out-of-phase protein"
FT /protein_id="AAA43038.1"
FT /translation="MPHGLSVCSRSSQLNYSQRCFYKSNSELRRGTSPRLSIPISLAPS
FT QRSRSPPSILGHPELRPRSHSPPPPNPQNSRDFSPVQSLACSRSPAFNCDVHETVQVSK
FT TCGSKPKIPRVDQLSTHCRRHHSLPLHLTHFSKQFNLLHARCSDVLFSSSDRRSLHSVS
FT RTRDPVLQSHSASRVSFHRSLSLPRDLHLQDLRSDSPLHPGESPLRLVQSAPPSPILAE
FT DFLHPLAFPRFVCDQAGILGPSPLHIDPARPTTKALSLCTPPRPAKSTSPCNNSQLPKP
FT TAASDKPAILPTAAASTQPGLLPNSRLRRTATSHLSAPTSPPPASANKRLQRSLHLHSR
FT SPHSSHFRPSRICANSKQQTRARLGHSKRVGQSADLVCQCPPPPPSMLPLLLLPRGKVK
FT APLRPTLASLSFGSHPIPYHVTSSPPLIQFQHPFPPPSATFSVSPLGVLTTAFALNPTQ
FT SAERSCDPESPTPTLGHKTTSLSRLPLPPPHSPHSAQDRASALATDVSNSETKNCPSPT
FT VPPPFLPNHLHPLLPGTDPPTTPRQLSPSPSSLSLRTFLDSAVISCDSSPVLPPSPSPS
FT SHSSSSFQSCTSPPRFPCYPPPPSALDLLFSSTPGTDPFPPPDTPPPHKRTIALERLRL
FT RQCATPFHSCDDVC"
FT CDS 109. .5628
FT /codon_start=1
FT /db_xref="GOA:P20126"
FT /db_xref="InterPro:IPR000606"
FT /db_xref="InterPro:IPR001788"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="InterPro:IPR007095"
FT /db_xref="InterPro:IPR008043"
FT /db_xref="UniProt/Swiss-Prot:P20126"
FT /note="replicase protein (putative); putative"
FT /protein_id="AAA43039.1"
FT /translation="MAFQSALEALNSTTHRDASTNPILNSVVEPLRDSLSLYPWLLPKE
FT AVPHLLSWGIPNSGLGVTPHPHPIHKTVETFLLFNHWHALARLPSTVMFMKPSKFQKLA
FT ALNPKFQELINFRLTAADTTRYPSTSLTFPSNSICFMHDALMYFSPAQIVDLFTQSPAL
FT ETLYCSLIVPPESHFTDLSLFPEIYTYKISGQTLHYIPENHHSGSYNQPLQAPSWLKIS
FT SILSPSLALSVTKLESWGPVHSILIQRGLPPKPSLSARPPVLPNQPPRATTPNSQNQLL
FT HQTSQLFFQLQQPQLSLVSFRIPDCVELPQATFLRQPLRHRLVPTSVYNALFTYTRAVR
FT TLRTSDPAGFVRTQSNKPEHAWVTPNAWDNLQTLSVNAPHRPQVCYHFFSSPVARLKLH
FT FAQHWRAYLLALTPFLTTSPLLLPLFNFNTPFPLPRLLSLFRRSVSSPRLLHSILPSQL
FT RGAAIPNRPLPLWVTKLHHFLDSHSLLPTPPIRPRIELQRLPLMSLIPKPKIVLPLLSL
FT LLSSPTIYIHFFQAQTPQQLHDNYHLHLHPSRFELSWTLQSYHVTQAQSFLPLLLPAPT
FT QAQASNPAPRPPAFHAIPLPPQPSTSSSPPLQEPTLSPHLIHPPLTREPSPLNGCACDS
FT ALLPSTAAMTSAEHPTPLNPPTPSPTPDVPPPDSPGNPSLLKQVPPEANLHPIHNPDLP
FT SSTTLPSGALTLVPAKTPSIYANPTPPSSHPFTPLADDPTAVGPCLPFHVLHPADYFPL
FT SAEFLTRTRHVPPSSLSHPKLNCLLTCFSELSGHSESDLWLSLQSILPDSQLQNPEVST
FT LGLSTDILTALCFIYHSSVTLHAPSGVYHYGIASSSTVYVIHYQPGPPPHFSLSPRLAA
FT SAPRCNPTNSRLVRQALRFKLNGEFLPFTQAYAHESSITHAKNLISNMKNGFDGIMSSL
FT TDSSKGPSPREKLTTLDSLIDVAAPREVSLIHIAGFAGCGKTHPIQKLLQTSPFHDFRI
FT SCPTNELRSEWKRDMQPTAENVWRFSTWESSLLKHSEILVIDEIYKLPRGYLDLSILAD
FT PTLSLVIILGDPLQGEYHSTSPHSSNHFLPSEVHRFKSYIDCYCFWSHRIPKQIASLFG
FT VVCHNTNEGFVRALTSHPPNSKNLTNATNTALSLQQMGHHAITISARRVTFTEAHTILL
FT DRHTNLLSPNNCLVALTRSRTGVYFVGNLHLASNSFGTNYMFSQALCQGTIDLNNVFPH
FT IMPHLPKMYEPIRSRSNRFVSGSLNFRPTTNSRLLSSLTKPTHLPPHIPTNHSLDVLVS
FT NPVLLGETLDPRLEVLHLPPTRLPLHLDLLPTVPSSSSFSSVDHLFPTPISPAICGYTF
FT ENLAAFFLPAHDPDLKEVLINDQKSNQFPYLDAPFELSCQPSSLLAPIHKPASDPTLLP
FT GSIKKRLRFRASSSPYSITPSDQLLGQHLFSSLCLAYGRNPNSVLPFQPELFSECICIN
FT DYAQLSSKTQATIVANHQRSDPDWRLTAVRIFAKAQHKVNDASIFSGWKACQTLALMHG
FT YIILVLGPVKKYQRIFDSKDRPPHIYYHCGKTPSQLSQWCQTHLSGSSYIANDYTAFDQ
FT SQHGEAVVLECLKMRRLSIPDSLIQLHSHLKCSVDTQFGPLTCMRLTGEPGTYDDNSDY
FT NLAVIYSQYSLNGHPILISGDDSVLCGTPPPSPLWPTLKKMLHLRFKIERTSHPLFCGY
FT YVSPHGAARNPYALFAKLMICVDDKSLHDKKLSYLSEFSTGHLAGDLVTSILPSHLLPY
FT QSAVHDFFCRNCTPAEKILLSLDPIPESKILQLILKVRWASQAFFSYLPQKARELLVAR
FT SSLPSLYSNPKVSQLESELLPFSQ"
FT CDS 5633. .6199
FT /codon_start=1
FT /db_xref="GOA:P20123"
FT /db_xref="HSSP:1E57"
FT /db_xref="InterPro:IPR000574"
FT /db_xref="InterPro:IPR008975"
FT /db_xref="UniProt/Swiss-Prot:P20123"
FT /note="virion protein"
FT /protein_id="AAA43040.1"
FT /translation="MEDTAIIRSPQPSINAPGFHLPPTDSQQSSAIELPFQFQATTFGA
FT TETAAQISLASANAITKLASLYRHVRLTQCAATITPTAAAIANPLTVNIVWVSDNSTAK
FT PTEILNVFGGSSYTFGGALNATKPLTIPLPMNSVNCMLKDSVLYTDCPKLLAYSAAPSS
FT PSKTPTATIQIHGKLRLSSPLLQAN"
XX
SQ Sequence 6331 BP; 1337 A; 2441 C; 987 G; 1566 T; 0 other;
J04374 Length: 6331 May 10, 2005 10:09 Type: N Check: 1463 ..
1 gtaatcagaa ccagaactaa ccctgttatc agccttagtt cttttacttt
51 cctgtccaaa tttctgaacc gactagtgcc ttcctagaac ccactacgtc
101 aatgcctcat ggcctttcag tctgctctcg aagctctcaa ctcaactact
151 cacagagatg cttctacaaa tccaattctg aactccgtcg tggaacctct
201 ccgcgactct ctatccctat atccctggct ccttcccaaa gaagccgttc
251 cccaccttct atcctggggc atcccgaact ccggcctcgg agtcactccc
301 cacccccacc caatccacaa aacagtcgag acttttctcc tgttcaatca
351 ctggcatgct ctcgctcgcc tgccttcaac tgtgatgttc atgaaaccgt
401 ccaagtttca aaaacttgcg gctctaaacc caaaattcca agagttgatc
451 aactttcgac tcactgccgc cgacaccact cgctacccct ccacctcact
501 cacttttcca agcaattcaa tttgcttcat gcacgatgct ctgatgtact
551 tttctccagc tcagatcgtc gatctcttca ctcagtctcc cgcactcgag
601 accctgtact gcagtctcat agtgcctcca gagtctcatt tcacagatct
651 ctctctcttc cccgagatct acacttacaa gatctcaggt cagactctcc
701 actacatccc ggagaatcac cactccggct cgtacaatca gcccctccaa
751 gccccatctt ggctgaagat ttcctccatc ctctcgcctt ccctcgcttt
801 gtctgtgacc aagctggaat cttggggccc agtccactcc atattgatcc
851 agcgaggcct accaccaaag ccctctctct ctgcacgccc ccccgtcctg
901 ccaaatcaac ctccccgtgc aacaactccc aactcccaaa accaactgct
951 gcatcagaca agccagctat tcttccaact gcagcagcct caactcagcc
1001 tggtctcctt ccgaattcca gactgcgtag aactgccaca agccaccttt
1051 ctgcgccaac ctctccgcca ccggctagtg ccaacaagcg tttacaacgc
1101 tctcttcacc tacactcgcg cagtccgcac tcttcgcact tccgacccag
1151 ccggatttgt gcgaactcaa agcaacaaac ccgagcacgc ttgggtcact
1201 ccaaacgcgt gggacaatct gcagaccttg tctgtcaatg ccccccaccg
1251 cccccaagta tgctaccact tcttctcctc ccccgtggca aggttaaagc
1301 tccacttcgc ccaacactgg cgagcctatc ttttggctct caccccattc
1351 cttaccacgt cacctcttct cctcccctta ttcaatttca acaccccttt
1401 ccccctccct cggctacttt ctctgtttcg ccgctcggtg tcctcaccac
1451 ggcttttgca ctcaatccta cccagtcagc tgagaggagc tgcgatcccg
1501 aatcgcccac tcccactctg ggtcacaaaa ctacatcact ttctcgactc
1551 ccactccctc ctccccactc cccccattcg gcccaggata gagcttcagc
1601 gcttgccact gatgtctcta attccgaaac caaaaattgt ccttccccta
1651 ctgtccctcc tcctttcctc cccaaccatc tacatccact tcttccaggc
1701 acagaccccc caacaactcc acgacaatta tcaccttcac cttcatccct
1751 ctcgcttcga actttcctgg actctgcagt catatcatgt gactcaagcc
1801 cagtccttcc tccctctcct tctcccagct cccactcaag ctcaagcttc
1851 caatcctgca cctcgccccc ccgctttcca tgctatcccc ctcccccctc
1901 agccctcgac ctcctcttct cctccactcc aggaaccgac cctttccccc
1951 cacctgatac acccccccct cacaagagaa ccatcgccct tgaacggctg
2001 cgcctgcgac agtgcgctac tcccttccac agctgcgatg acgtctgctg
2051 aacatcccac tccactcaac ccccccacac ctagcccaac accagacgtc
2101 cctcctcccg actcacccgg taacccatca cttttgaagc aagtccctcc
2151 cgaagcgaac ttgcatccta tccacaaccc agacctcccc tcttccacca
2201 ctcttccttc tggggccctg acactggtcc cagccaaaac tccttccatc
2251 tacgccaatc ccaccccccc cagttcccat ccgttcaccc cactggctga
2301 tgaccccact gctgtgggtc cttgcctacc gttccacgtt ctccacccgg
2351 ctgactactt tcctctttca gccgagtttc tcacacggac ccggcatgtc
2401 cccccctctt ctctctcaca tccaaaactc aattgcctac tcacctgctt
2451 ttctgaactt tcaggacact ctgagtcaga tctttggttg tccctgcaat
2501 caatacttcc tgactcccaa ctccaaaatc ctgaagtctc gacacttggc
2551 ctgtccactg acattctcac agctctctgc ttcatctacc attcatctgt
2601 gactctccat gccccctcag gagtttatca ctacggcata gcctcctctt
2651 ctaccgtcta tgtcatccac tatcaaccag gccctcctcc tcatttttct
2701 ctctccccta gacttgccgc ttctgctcct cgctgcaacc ccaccaacag
2751 cagattggtc agacaagctc tgcggtttaa attgaacggc gagtttctcc
2801 ccttcaccca ggcttacgcg catgaatctt ccatcaccca tgccaaaaac
2851 ctcatctcca acatgaagaa tggttttgat ggaatcatgt cttctctcac
2901 tgactcctct aagggtccct ccccccgtga aaaactgacc actctcgact
2951 ctctcataga tgtcgctgcc cctcgcgaag tttctctcat ccacatcgcc
3001 ggcttcgcag gctgcggcaa gacccacccc atccaaaaac tcctccaaac
3051 ttcccctttt cacgacttcc gaatctcatg ccccactaat gaactccgat
3101 ccgaatggaa gcgtgatatg caaccaacag ctgaaaatgt ttggaggttc
3151 tccacatggg aatccagcct gctcaaacat tccgagatcc tcgtaatcga
3201 cgagatttac aagctccctc gtggctacct agatctctcc atccttgctg
3251 atccaactct ctccttggtc atcatccttg gtgaccctct ccaaggagag
3301 tatcactcga cctctcctca cagctccaat cactttcttc caagtgaggt
3351 ccaccgcttc aagtcttaca tcgactgcta ctgtttttgg tcccaccgca
3401 ttccaaagca gatagcatcc ttgttcggcg tagtatgcca caacacgaac
3451 gaaggtttcg tgagagccct cacatctcat ccccccaatt ccaaaaacct
3501 caccaatgcg accaacactg ctctcagtct ccaacagatg ggccaccacg
3551 ctatcaccat cagcgccaga agggtcacct tcaccgaggc ccatacaatt
3601 ctgcttgatc gtcataccaa ccttctctcc cccaacaact gtcttgttgc
3651 cctcacccgc agccgcactg gcgtctactt cgtcggcaat ctgcacctgg
3701 catcaaacag ctttggcaca aactacatgt tctctcaagc tctctgccaa
3751 ggcacaatcg acctaaacaa cgtgttcccc cacatcatgc ctcacctccc
3801 gaaaatgtat gaacccatcc gctcccggtc caaccgtttt gtgtctgggt
3851 ccctcaattt tcgaccaacc accaattccc gcctcctttc cagtctcact
3901 aagccaaccc acctcccccc tcacatccct accaaccact ccctggatgt
3951 cctagtttcc aaccctgtgc tccttggtga gaccctcgac cctcgattgg
4001 aggtcctcca cctcccccca actcgcctcc cattgcatct ggacctcctg
4051 cccacagtac cttcctcttc cagcttctcc tcagtcgacc atcttttccc
4101 aacccccatc tcccccgcta tctgcggcta caccttcgaa aatttggccg
4151 cattcttcct cccagctcat gacccggacc taaaggaggt gctcatcaat
4201 gaccaaaaga gcaaccagtt cccatacttg gacgcccctt ttgagctttc
4251 gtgccaaccc tcctcactgt tggcaccaat tcacaagccg gcctcggatc
4301 caacccttct ccctggctcc atcaagaaac gcctcagatt ccgcgcttct
4351 tcctccccat attccatcac tccatctgat caacttcttg gtcaacacct
4401 cttctcttct ttgtgcctgg cttatgggcg caaccccaat tctgtcctcc
4451 ccttccaacc tgagctcttc agtgagtgca tatgcattaa tgattacgct
4501 caactctcct ccaagactca agccaccatc gtggccaatc atcaaaggtc
4551 tgatcctgac tggcgcctaa ctgctgtccg catctttgcc aaggctcaac
4601 acaaagtaaa cgacgcttcc atcttttccg ggtggaaggc ttgccaaact
4651 ctagccctga tgcacggtta catcattctc gtactcggcc cagtcaagaa
4701 ataccaacgc atttttgatt ccaaggacag acctccccac atctactacc
4751 actgcggtaa aactccctcc cagctctccc aatggtgcca aactcacctt
4801 tctggctctt cctacatcgc caacgactac actgcctttg atcagtccca
4851 acacggcgag gctgtggtcc tggaatgttt gaagatgcgc cgcctctcca
4901 tcccggactc tctcattcag ctccactccc acctcaagtg ttccgtcgac
4951 acccagttcg gccccctcac ctgcatgcgc ctcactggcg agccgggcac
5001 ttatgatgac aactctgact acaacctagc tgtcatctac tcccaatact
5051 ccctcaatgg ccaccccatt ctgatctcag gcgatgactc cgtcctttgc
5101 ggcacaccgc ccccttctcc actttggccc actctcaaga aaatgcttca
5151 tctccgtttc aagatcgaac ggacctccca ccccctcttc tgcgggtatt
5201 acgtctcccc tcatggcgct gcccgcaacc cgtatgctct cttcgccaag
5251 ctcatgatct gcgttgatga caagagcctc catgacaaga agttgtccta
5301 tctctctgaa ttctccactg gccatctggc tggcgacctg gtcacctcca
5351 ttctcccttc ccacctactt ccctatcagt ccgccgtgca cgacttcttc
5401 tgccggaatt gcacgcccgc ggaaaaaatt ctcctgtctc tggacccaat
5451 ccctgagtcc aaaatcctcc agctcattct caaagttcgc tgggcttctc
5501 aagctttctt ttcctacctg cctcaaaaag ctcgcgaact ccttgtggca
5551 cgctcttctc tcccgtccct ctattccaat cccaaagtct ctcaactgga
5601 gtctgaattg cttcccttct ctcaatagat caatggaaga cacagcaatc
5651 atcagaagcc ctcagccctc cataaacgca ccaggcttcc atctgccacc
5701 caccgactca caacaatcct ctgctattga actccccttc cagtttcagg
5751 ccaccacttt tggcgcgact gaaacagctg ctcaaatcag tctggcctcc
5801 gccaacgcta ttaccaagct cgcgtctctc taccgccatg tgcggctcac
5851 gcagtgcgct gccaccatca ctccgacagc ggccgccatt gccaatcctc
5901 tcactgtcaa catcgtctgg gtgtctgaca attccactgc caagcccacc
5951 gagattctca atgtctttgg tggatcttcc tacacgtttg gcggcgccct
6001 caatgccacc aagcccctta ccatccctct ccccatgaac tcggtcaact
6051 gtatgctcaa ggactctgtt ctttacacag attgcccaaa gctcctggcc
6101 tactcagctg ctcccagctc tccctccaaa accccaaccg ccactatcca
6151 aatccatggc aagctccgct tgtcctcccc cctcctccaa gccaattaac
6201 tctctctccc tcagccacca cctcgctcct cccccatctc ctatggtaat
6251 tgcggacagt tccgctccct ctagcacaca gaggtccatt tgggtgcgac
6301 tcccccccct cccgtgggtc aacgggaacc a