Sequence of DPV Blueberry red ringspot virus
Blueberry red ringspot virus isolate BRRSV03 transcriptional activator gene, complete cds.
ACC No: JF303673
Dated: 2011-06-21 | Length: 1284 | CRC: -361660650
ID JF303673; SV 2; linear; genomic DNA; STD; VRL; 1284 BP.
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AC JF303673;
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DT 20-FEB-2011 (Rel. 107, Created)
DT 21-JUN-2011 (Rel. 109, Last updated, Version 5)
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DE Blueberry red ringspot virus isolate BRRSV03 transcriptional activator
DE gene, complete cds.
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KW .
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OS Blueberry red ringspot virus
OC Viruses; Retro-transcribing viruses; Caulimoviridae; Soymovirus.
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RN [1]
RP 1-1284
RA Kalinowska E., Paduch-Cichal E., Chodorska M., Sala-Rejczak K.;
RT "Molecular characterization of Blueberry red ringspot virus";
RL Unpublished.
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RN [2]
RP 1-1284
RA Kalinowska E., Paduch-Cichal E., Chodorska M., Sala-Rejczak K.;
RT ;
RL Submitted (03-FEB-2011) to the INSDC.
RL Department of Plant Pathology, Warsaw University of Life Sciences
RL WULS-SGGW, Nowoursynowska 166, Warsaw 02-787, Poland
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RN [3]
RC Sequence update by submitter
RP 1-1284
RA Kalinowska E., Paduch-Cichal E., Chodorska M., Sala-Rejczak K.;
RT ;
RL Submitted (02-MAY-2011) to the INSDC.
RL Department of Plant Pathology, Warsaw University of Life Sciences
RL WULS-SGGW, Nowoursynowska 166, Warsaw 02-787, Poland
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CC On May 2, 2011 this sequence version replaced gi:323389076.
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FH Key Location/Qualifiers
FH
FT source 1. .1284
FT /organism="Blueberry red ringspot virus"
FT /host="Vaccinium corymbosum (blueberry) Darrow"
FT /isolate="BRRSV03"
FT /mol_type="genomic DNA"
FT /country="Poland"
FT /collection_date="2010"
FT /db_xref="taxon:172220"
FT CDS 1. .1284
FT /codon_start=1
FT /product="transcriptional activator"
FT /db_xref="UniProtKB/TrEMBL:F1JYN7"
FT /protein_id="ADX60605.2"
FT /translation="MEGAIKTLENQISTKEQSFQAKKQKLAELEAEINNLRSTLAILSG
FT DSSKLSPSVPEEKKHSVLANMEEVNRQVALARSKKEYYVIFNGPMKGIYDEWHKAAPHI
FT QGQSNIIHKKYPTIDEAKKALGGSYAAITNAPASPKDSKVLLGRFKVPLVPTIDSIQTI
FT ESKMKALKVTQKKYNDYMEILYNYKDQHKLLHFYPKYRDTIGYKAIILPEASALTTYEL
FT FKNGLADTIYFSDSKIFNDFPERIKQTINNYFKRFAKERPCYIKLFSTHPTFSIQGEED
FT MPSYSVLQIGISNGDMPLMDTLHMPVPKHEELKQINLQNFIGVINHLSNLTANIKMLYK
FT SDTMIIYSKATKEIEPDQEAVFIEFEKNFIENKIPKMTGEMKKELCNHMTKEDHPGHYC
FT QYCPFIQQDDKKSASSEDEEKITMEVEE"
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SQ Sequence 1284 BP; 518 A; 245 C; 225 G; 296 T; 0 other;
jf303673 Length: 1284 21-JUN-2011 Type: N Check: 2751 ..
1 atggaaggag ctataaaaac attggagaat caaatcagca ccaaagaaca
51 atcatttcaa gcaaagaagc agaagctagc agaactcgaa gcagagatca
101 acaatctcag atcaacatta gccatactca gtggagatag cagcaaacta
151 tcaccatcag tcccagagga aaagaagcat tcagttctag caaacatgga
201 agaagtcaac agacaagttg cattagccag aagcaagaaa gaatattatg
251 tcatttttaa tggacccatg aaagggatct atgacgaatg gcataaagca
301 gcaccacaca ttcaaggaca atccaacatc attcacaaga aatatccaac
351 cattgacgaa gcaaaaaagg cccttggagg aagctacgca gcaatcacta
401 atgcaccagc atcaccgaaa gattcaaaag tattattggg aagatttaag
451 gtccctttag taccaacaat tgattcaatt caaaccattg agtcaaaaat
501 gaaagcatta aaggttactc agaagaaata taatgattat atggagatcc
551 tctacaatta caaggatcaa cataaattat tacatttcta ccctaagtac
601 cgagacacga taggatacaa agcaatcatt ttgcccgaag catcagcact
651 aaccacctat gaattgttca aaaatggatt agctgacact atctattttt
701 cggactcaaa aatattcaat gatttccctg aaaggatcaa gcaaaccatc
751 aacaactatt tcaagaggtt cgccaaggaa agaccatgtt acatcaagtt
801 attcagtact catccaacct tcagcattca aggagaagaa gacatgccca
851 gttattcagt attacagatt ggaatcagca atggagatat gcctttaatg
901 gatacccttc atatgccagt acccaagcat gaggagttaa aacagatcaa
951 tctacaaaat ttcattggag taattaatca tttatctaat ctgacagcaa
1001 acattaaaat gctgtataaa tcagatacaa tgattatcta ttccaaagca
1051 accaaggaga ttgaaccaga tcaagaagca gtatttattg aatttgaaaa
1101 gaattttatt gaaaataaaa ttccaaaaat gacgggggag atgaagaaag
1151 aattatgcaa tcatatgacc aaggaagatc atccaggaca ctactgccaa
1201 tattgtccat tcattcagca ggatgataag aagtcagcat caagtgaaga
1251 cgaagaaaag atcaccatgg aagtggaaga ataa