Sequence of DPV Blueberry red ringspot virus
Blueberry red ringspot virus isolate BRRSV20 transcriptional activator gene, complete cds.
ACC No: JF303679
Dated: 2011-06-21 | Length: 1284 | CRC: -443822792
ID JF303679; SV 2; linear; genomic DNA; STD; VRL; 1284 BP.
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AC JF303679;
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DT 20-FEB-2011 (Rel. 107, Created)
DT 21-JUN-2011 (Rel. 109, Last updated, Version 5)
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DE Blueberry red ringspot virus isolate BRRSV20 transcriptional activator
DE gene, complete cds.
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KW .
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OS Blueberry red ringspot virus
OC Viruses; Retro-transcribing viruses; Caulimoviridae; Soymovirus.
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RN [1]
RP 1-1284
RA Kalinowska E., Paduch-Cichal E., Chodorska M., Sala-Rejczak K.;
RT "Molecular characterization of Blueberry red ringspot virus";
RL Unpublished.
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RN [2]
RP 1-1284
RA Kalinowska E., Paduch-Cichal E., Chodorska M., Sala-Rejczak K.;
RT ;
RL Submitted (03-FEB-2011) to the INSDC.
RL Department of Plant Pathology, Warsaw University of Life Sciences
RL WULS-SGGW, Nowoursynowska 166, Warsaw 02-787, Poland
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RN [3]
RC Sequence update by submitter
RP 1-1284
RA Kalinowska E., Paduch-Cichal E., Chodorska M., Sala-Rejczak K.;
RT ;
RL Submitted (02-MAY-2011) to the INSDC.
RL Department of Plant Pathology, Warsaw University of Life Sciences
RL WULS-SGGW, Nowoursynowska 166, Warsaw 02-787, Poland
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CC On May 2, 2011 this sequence version replaced gi:323389088.
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FH Key Location/Qualifiers
FH
FT source 1. .1284
FT /organism="Blueberry red ringspot virus"
FT /host="Vaccinium corymbosum (blueberry) Darrow"
FT /isolate="BRRSV20"
FT /mol_type="genomic DNA"
FT /country="Poland"
FT /collection_date="2010"
FT /db_xref="taxon:172220"
FT CDS 1. .1284
FT /codon_start=1
FT /product="transcriptional activator"
FT /db_xref="UniProtKB/TrEMBL:F1JYP3"
FT /protein_id="ADX60611.2"
FT /translation="MEGAIKTLENQISTKEQSFQAKKQKLAELEAEINNLRSTLAILSG
FT DSSKLSPSAPEEKKYSVLANIEEVNKQVAAAKGKKEYYVIFNGPMKGIYDEWHKAAPHI
FT QGQANIIHKKYPTIDEAKKALGGSYAAITNAPASQKDSKVLLGRFKVPTVPTIDSIQTI
FT ESKMKALKVTQKKYNDYMEILYNYKDQHKLLHFYPKYRDTIGYKAIILPEASALTTYEL
FT FKNGLADTIYFSDAKIFNDFPERIKQTINNYFKRFAKERPCYIKLFSTHPTFSIQGEED
FT MPSYSVLQIGISNGDMPLMDTLHMPVPKHEELKQINLQNFIGVINHLSNLTANIKMLYK
FT SDTMIIYSKANKEIEPDQEAVFIEFEKNFIENKIPKMTGEMKKELCNHMNKEDHPGHYC
FT QYCPFIQQDDKKSASSEDEEKITMEVEE"
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SQ Sequence 1284 BP; 524 A; 245 C; 225 G; 290 T; 0 other;
jf303679 Length: 1284 21-JUN-2011 Type: N Check: 9879 ..
1 atggaaggag ctataaaaac attggagaat caaattagca ccaaggagca
51 atcatttcaa gcaaagaagc agaagctagc agaactcgaa gcagagatca
101 acaatctcag atcaacatta gccatactca gtggagatag tagcaaacta
151 tcaccatcag ccccagaaga aaagaagtat tcagttctag ccaatattga
201 agaagtcaac aaacaagttg cagcagccaa aggcaagaag gaatattatg
251 tcatttttaa tggacccatg aaagggatct atgacgaatg gcataaagca
301 gcaccacaca ttcaaggaca agccaacatc attcacaaga aatatccaac
351 catcgacgaa gcaaagaaag cccttggagg aagctacgca gcaatcacca
401 atgcaccagc atcacagaaa gattcaaaag tactattggg aagatttaag
451 gtccctacag taccaacaat tgattcaatt caaaccattg agtcaaaaat
501 gaaagcatta aaggttactc agaagaaata taatgattat atggagatcc
551 tctacaatta taaggatcaa cataaattat tacatttcta ccctaagtac
601 cgagacacaa taggatacaa agcaataatc ttgcccgaag catcagcact
651 aaccacctat gaattgttca aaaatggatt agctgacact atctattttt
701 cggacgcaaa aatattcaat gatttccctg aaaggatcaa gcaaaccatc
751 aacaactatt tcaagaggtt cgccaaggaa agaccatgtt atatcaagtt
801 attcagtact catccaacct tcagcattca aggagaagaa gacatgccca
851 gctattcagt attacagatt ggaatcagca atggagatat gcctttaatg
901 gatacccttc atatgccagt acccaagcat gaggagttaa aacagatcaa
951 tctacaaaat ttcattggag taattaatca tttatctaat ctgacagcaa
1001 acattaaaat gctgtataaa tcagatacaa tgattatcta ttccaaagca
1051 aacaaggaaa ttgaaccaga tcaagaagca gtatttattg aatttgaaaa
1101 gaattttatt gaaaataaaa ttccaaaaat gacgggggag atgaagaaag
1151 aattatgcaa ccacatgaac aaagaagatc atccaggaca ctactgtcaa
1201 tattgtccat tcattcagca ggatgataag aagtcagcat caagtgaaga
1251 cgaagaaaag atcaccatgg aagtggaaga ataa