Sequence of DPV Tomato yellow leaf curl China virus
Tomato yellow leaf curl China virus isolate JX-4 AV1 protein (AV1) gene, partial cds; AC3 protein (AC3) and AC2 protein (AC2) genes, complete cds; and AC1 protein (AC1) gene, partial cds.
ACC No: JF681150
Dated: 2011-05-01 | Length: 1497 | CRC: -393108486
ID JF681150; SV 1; linear; genomic DNA; STD; VRL; 1497 BP.
XX
AC JF681150;
XX
DT 01-MAY-2011 (Rel. 108, Created)
DT 01-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE Tomato yellow leaf curl China virus isolate JX-4 AV1 protein (AV1) gene,
DE partial cds; AC3 protein (AC3) and AC2 protein (AC2) genes, complete cds;
DE and AC1 protein (AC1) gene, partial cds.
XX
KW .
XX
OS Tomato yellow leaf curl China virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-1497
RA Meng J.R., Li Z.B., Wei M.C., Zou C.W., Liao Y.M., Chen B.S.;
RT "Molecular identification of the pathogen causing tobacco leaf curl
RT disease";
RL Unpublished.
XX
RN [2]
RP 1-1497
RA Meng J.R., Li Z.B., Wei M.C., Zou C.W., Liao Y.M., Chen B.S.;
RT ;
RL Submitted (10-MAR-2011) to the EMBL/GenBank/DDBJ databases.
RL Guangxi Key Laboratory of Subtropical Bioresource Conservation and
RL Utilization, Guangxi University, 100 Daxue East Road, Nanning, Guangxi
RL 530004, China
XX
FH Key Location/Qualifiers
FH
FT source 1. .1497
FT /organism="Tomato yellow leaf curl China virus"
FT /host="tobacco"
FT /isolate="JX-4"
FT /mol_type="genomic DNA"
FT /country="China:Jingxi"
FT /collection_date="12-Jun-2010"
FT /db_xref="taxon:185793"
FT gene <1. .638
FT /gene="AV1"
FT CDS <1. .635
FT /codon_start=3
FT /gene="AV1"
FT /product="AV1 protein"
FT /protein_id="AEB40020.1"
FT /translation="RPMYRKPMMYRMYRSPDVPRGCEGPCKVQSYEARHDVSHTGKVIC
FT VSDVTRGNGITHRVGKRFCVKSIYIIGKIWMDENIKVKNHTNTVMFFLVRDRRPSGTPM
FT DFQQVFNCYDNEPSTATVKNDLRDRFQVRRKFYSTVTGGQYACKEQTLVKKFIRLNTHV
FT LYNHQEQAKYENHTENALLLYMVSTHASNPVYATLKVRIYFYDSQLN"
FT gene complement(632. .1036)
FT /gene="AC3"
FT CDS complement(632. .1036)
FT /codon_start=1
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="AEB40021.1"
FT /translation="MDSRTGELLTATQSENGVYIWTVKNPLYFKITKHHERPFLRNHDI
FT ITIQVQFNYNLRKALGIHKCFLTCQIWTRLQPQTSHFLRVFKYQFIKYLDRLGVISINN
FT CIRAFTHVLYDVLNGTIDVIENHDIKFNIY"
FT gene complement(777. .1181)
FT /gene="AC2"
FT CDS complement(777. .1181)
FT /codon_start=1
FT /gene="AC2"
FT /product="AC2 protein"
FT /protein_id="AEB40022.1"
FT /translation="MRSSSPSTGHSTQVPIKVQHRIAKRTTRRRRVDLPCGCSYFVALG
FT CHNHGFTHRGTTHCNSIREWRVYLDGQKSPVFQDNQTPRETISEEPRHNNNTSPIQLQP
FT EESVGDTQMFSNLPNLDSFTTSDLAFLKSI"
FT gene complement(1084. .>1497)
FT /gene="AC1"
FT CDS complement(1084. .>1497)
FT /codon_start=1
FT /gene="AC1"
FT /product="AC1 protein"
FT /protein_id="AEB40023.1"
FT /translation="TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLK
FT HFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWAV
FT KNAIFVTLNGPLYSGSYQGATPNRQEDNQTTTS"
XX
SQ Sequence 1497 BP; 409 A; 289 C; 323 G; 476 T; 0 other;
jf681150 Length: 1497 01-MAY-2011 Type: N Check: 3476 ..
1 acaggcctat gtataggaag cccatgatgt accggatgta cagaagccct
51 gatgttccaa ggggttgtga aggcccatgt aaggttcaat catatgaggc
101 ccgtcatgat gtttctcata ctggtaaggt tatttgtgta tccgatgtga
151 ctcgtggtaa cggaattact catcgtgttg gcaagaggtt ctgtgttaaa
201 tccatttaca tcattgggaa gatatggatg gacgagaata ttaaagtgaa
251 gaatcataca aatacagtaa tgtttttcct tgttagagat cgacgtccaa
301 gtggtacacc tatggatttc cagcaagtct tcaattgtta tgacaatgaa
351 cctagcactg ctacggtaaa aaacgattta agggatcgtt ttcaagttcg
401 tcgtaaattc tattctacgg ttactggcgg acagtacgct tgtaaggagc
451 aaactttggt caagaaattc attcgtctta acactcatgt tctttacaac
501 catcaagaac aggcgaagta cgagaatcat acggagaatg cattattgtt
551 gtatatggtt tctactcatg caagtaaccc tgtatatgcg actttgaaag
601 ttcgcatcta tttctatgat tcacaactga attaataaat attgaatttt
651 atatcatgat tttcaattac atctattgtc ccattcaata catcatataa
701 tacatgtgta aaagccctaa tacaattgtt aatgctaatc acgcctaacc
751 tatctaaata tttaataaat tggtatttaa atactcttaa gaaatgcgag
801 gtctgaggtt gtaaacgagt ccagatttgg caggttagaa aacatttgtg
851 tatccccaac gctttcctca ggttgtagtt gaattggact tgtattgtta
901 ttatgtcgtg gttcctcaga aatggtctct cgtggtgttt ggttatcttg
951 aaatacaggg gatttttgac cgtccagata tacacgccat tctctgattg
1001 agttgcagtg agtagttccc cggtgcgtga atccatgatt gtgacagcct
1051 aaagcaacga agtatgaaca gccacacggt agatcaactc gtcgtcgtct
1101 ggttgtcctc ttggcgattc ggtgttgcac cttgatagga acctgagtag
1151 agtggcccgt tgagggtgac gaagatcgca ttctttacag cccagtttcg
1201 aagtgctgag ttcttttcct cttccagata ctctttatag ctggaattgg
1251 gtcctggatt gcagaggaag atagtgggta tcccgccttt aatttgaact
1301 ggtttcccgt acttggtgtt gctttgccag tccctttggg cccccatgaa
1351 ttctttaaag tgctttaggt aatgcggatc tacgtcatca atgacgttga
1401 accaagcatc attactgtac acctttggac tcagatctaa atgaccacac
1451 aaataattat gtggtcctaa tgacctggcc cacattgtct taccggt