Sequence of DPV Bean golden mosaic virus
Bean golden mosaic virus isolate BgV03B.1.C47 segment DNA-B, complete sequence.
ACC No: JF694459
Dated: 2012-03-25 | Length: 2621 | CRC: -1139419050
ID JF694459; SV 1; circular; genomic DNA; STD; VRL; 2621 BP.
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AC JF694459;
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DT 02-JAN-2012 (Rel. 111, Created)
DT 25-MAR-2012 (Rel. 112, Last updated, Version 2)
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DE Bean golden mosaic virus isolate BgV03B.1.C47 segment DNA-B, complete
DE sequence.
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KW .
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OS Bean golden mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2621
RX PUBMED; 22397740.
RA Wyant P.S., Strohmeier S., Schafer B., Krenz B., Assuncao I.P., Lima G.S.,
RA Jeske H.;
RT "Circular DNA genomics (circomics) exemplified for geminiviruses in bean
RT crops and weeds of northeastern Brazil";
RL Virology 427(2):151-157(2012).
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RN [2]
RP 1-2621
RA Wyant P.S., Strohmeier S., Schaefer B., Krenz B., Assuncao I.P.,
RA Lima G.S.A., Jeske H.;
RT ;
RL Submitted (15-MAR-2011) to the INSDC.
RL Molecular Biology and Plant Virology, University of Stuttgart,
RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany
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FH Key Location/Qualifiers
FH
FT source 1. .2621
FT /organism="Bean golden mosaic virus"
FT /segment="DNA-B"
FT /host="Phaseolus sp."
FT /isolate="BgV03B.1.C47"
FT /mol_type="genomic DNA"
FT /country="Brazil:Alagoas"
FT /db_xref="taxon:10839"
FT gene 435. .1196
FT /gene="BV1"
FT CDS 435. .1196
FT /codon_start=1
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /db_xref="UniProtKB/TrEMBL:G9CLU9"
FT /protein_id="AEI91354.1"
FT /translation="MYNSRNKRGATTTSRRSYSRYPLSRRPYSVNRIIGKRGSNIHRKA
FT QDDGKMSAQRLHENQFGPEFVMAHNSAISTFITFPSLGKVEPNRSKGFIKLKRLRFKGT
FT VKIERVLNMDGSTPKIEGVFSMVVVVDRKPHLGSSGCLHTFDELFGARIHSHGNLAISP
FT SLKDRFYIRHVHKRVLSVEKDSMMVDVEGSTYLSNRRFNCWATFKDDERDSCNGVYANI
FT SKNALLVYYCWMSDAMSKASTFVSFDLDYVG"
FT gene complement(1265. .2146)
FT /gene="BC1"
FT CDS complement(1265. .2146)
FT /codon_start=1
FT /gene="BC1"
FT /product="movement protein"
FT /db_xref="UniProtKB/TrEMBL:G9CLU4"
FT /protein_id="AEI91355.1"
FT /translation="MESQLVNPPTAFNYVESHRDEYQLSHDLNEIVLQFPSTTAQLSAR
FT LSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTYPIRCNIDLHFF
FT SSSFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKISTAKHSVDIPFKPPTVKILS
FT TQFTEKDVDFSHVGYGKWERKLIRSASTSRYGLHSPITLKPGETWATKSTIGTGTSDAD
FT SELDNPIHPYRQLHRLDTSILDPGESASIIGARRTESSITLSMAQLNELVKTAAQECIN
FT NNCSPVQPKSLK"
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SQ Sequence 2621 BP; 724 A; 432 C; 557 G; 908 T; 0 other;
jf694459 Length: 2621 25-MAR-2012 Type: N Check: 5046 ..
1 accggatggc cgcccgattt ttttggggta catctcttat tgggcctcat
51 gggcctcctt ttcccccctg aaatcctgac cgtttatttc agttccgcaa
101 aactagttga gcgtgttttt gaaatccgtt gttgatgtga cgacacgtgt
151 tccatataag ggcttattcg tcatatgacg taatgaccaa ctttagtttt
201 gcacgtggcg cgttctacaa tgttgcattt aatttgaact gtttatctaa
251 cggctatttt tgattcaaat tttgaatcat gtgatagttg tcagaattgg
301 ctttaaaatt ctgacattgt actatatatt tgttatggac caattaaatg
351 ccatgtttcg cgtctattta attgatgttg tatatatagt gtgtatatat
401 tgtgatcata tgtatttttg aaatatagtc gaatatgtat aattcgcgaa
451 acaaacgtgg tgctactact acttcgagac gaagttattc aaggtatccc
501 ttgagtaggc gtccatatag tgtgaataga atcattggca agcgtggatc
551 gaatattcat agaaaggccc aggatgatgg taaaatgtca gcccaacgtt
601 tacatgagaa tcaatttggg cctgaatttg tcatggccca taactcagcg
651 atatcaactt ttattacttt cccttctctt ggtaaagttg aaccgaatcg
701 atcaaaggga tttattaagt taaaacgttt acggtttaag ggtactgtta
751 aaattgaacg tgttttgaat atggatggtt caactcctaa gattgaaggc
801 gtattttcca tggttgttgt tgtcgaccga aaacctcatt tgggatcgtc
851 tggatgtcta catacatttg atgaattgtt tggtgcaagg attcacagtc
901 atggtaattt agccatatca ccgtccctta aagaccgttt ttatatacgt
951 catgtgcaca aacgtgtgct ttcagtggag aaggatagca tgatggttga
1001 tgttgaagga agtacatatt tgtctaatag gcgttttaat tgttgggcta
1051 cctttaaaga tgatgaacgt gattcttgta atggcgttta tgctaacata
1101 agcaagaatg ccctcttagt gtattattgt tggatgtcgg atgctatgtc
1151 caaggcatct acgtttgtgt catttgatct tgattatgtt ggatgaataa
1201 tattagttca aataagcctt taatatttag cacgactatg catgaaaata
1251 tttacaaaat atttttattt caacgatttt ggttgaacag gagaacaatt
1301 attgttaata cattcttggg ccgcagtctt aaccaattcg tttaattggg
1351 ccattgaaag ggtgatactt gactcggttc ttcgtgctcc tattatagat
1401 gccgattctc cagggtctag tatacttgtg tccaatctat gaagttgtct
1451 atatggatgt attgggttgt ctaattcaga gtccgcatct gacgtaccgg
1501 ttccaattgt actctttgtt gcccatgttt caccgggttt taatgtaatt
1551 gggctgtgaa gcccatatct tgatgtagat gcggacctga tcaatttcct
1601 ctcccatttt ccatagccaa cgtgggagaa atccacatct ttctcagtga
1651 attgtgtgga taatattttt acggttgggg gtttgaaagg aatatccacc
1701 gaatgtttcg cagtggatat cttcagtttc cccttaaatt tcgcaaagtg
1751 tgttctttga tgaacatttg tgtcgctgac tctgtaatac aatttccaag
1801 gaattgggtc tttaagggag aagaatgaag atgaaaaaaa gtggagatct
1851 atgttacatc ttatgggata tgtccacgat gcttgtaatg attcgttatc
1901 cgtcattcgt ttatcgtgaa tctccactat cacagttcct gttgcattga
1951 taggaacttg ttgtctgtat tcaatgacgc aatgatctat cttcatacag
2001 ctacgactta atctggcgct taattgagct gttgttgatg gaaattgcaa
2051 tactatctca ttcaagtcat gagacaattg atattcatca cggtgagatt
2101 cgacataatt gaacgctgtt ggtggattaa ctaattgaga ctccattgtg
2151 aaaagaagat aagaaagaat gaccgcgcag cggactcggt tccggagttt
2201 atgaaacaga gactataaaa gagatatgtt cttctgaaga acaatttgag
2251 ataaagataa taagagatgt tgttatgtat gacatatggg cgctgtttca
2301 tagtttaaat agacaagttt ctatacgtat aactcggtaa agtaatcata
2351 gttatgtatc ccaactcgga aaagttatca tttattaatt ttattcaatg
2401 tgtatataat tgtgtgtacc cccattgagt tcccgctcat aagtccttat
2451 gtattgtgtt aatgtttaaa acgcttcggt ggtggcatat ttgtaaataa
2501 gagggtgtac cccgattgag ctctcgctca taagtctcta tgaattgggg
2551 taaaggggac aatatatagt ataagttcct aagggcttaa gggacacgtg
2601 taggccatcc gttataatat t