Sequence of DPV Potato yellow vein virus

Potato yellow vein virus clone 292b coat protein (cp) gene, complete cds.

ACC No: JF718285

Dated: 2011-05-01 | Length: 768 | CRC: 1003246174

                
ID   JF718285; SV 1; linear; genomic RNA; STD; VRL; 768 BP.
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AC   JF718285;
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DT   01-MAY-2011 (Rel. 108, Created)
DT   01-MAY-2011 (Rel. 108, Last updated, Version 1)
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DE   Potato yellow vein virus clone 292b coat protein (cp) gene, complete cds.
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KW   .
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OS   Potato yellow vein virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Crinivirus.
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RN   [1]
RP   1-768
RA   Rodriguez-Burgos P., Chaves G., Franco-Lara L., Guzman-Barney M.;
RT   "Low molecular variability of Potato yellow vein virus (PYVV) isolates of
RT   Solanum phureja and Solanum tuberosum from Colombia";
RL   Phytopathology 100(6):S176-S176(2010).
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RN   [2]
RP   1-768
RA   Rodriguez-Burgos P., Franco-Lara L., Guzman-Barney M.;
RT   ;
RL   Submitted (20-MAR-2011) to the EMBL/GenBank/DDBJ databases.
RL   Biotechnology Institute, National University of Colombia, Carrera 30 45-03,
RL   Bogota 111321, Colombia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .768
FT                   /organism="Potato yellow vein virus"
FT                   /host="Solanum phureja"
FT                   /isolate="292"
FT                   /mol_type="genomic RNA"
FT                   /country="Colombia:Cundinamarca, Chipaque"
FT                   /collection_date="Apr-2008"
FT                   /identified_by="P. Rodriguez-Burgos"
FT                   /clone="292b"
FT                   /db_xref="taxon:103881"
FT   gene            1. .768
FT                   /gene="cp"
FT   CDS             1. .768
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="AEC22831.1"
FT                   /translation="MDPHGNPIVEPESSNSPESAGVSFTDSQKPPVDRKVKDDSYNLDL
FT                   LISNVGRRDDIISPDDMSLDKLSKIQVRADRGDVLNDEDKLIFEGCLKNFCKRLTGVDP
FT                   DPETFLGFFMSVAQMSLNQSTSVKNRKNLQLKNYLKIGDKEYIWKTADLLNYLSGQFPN
FT                   KSNPLRQYMRLCENQIEMLKSSGKIVSDGHLAAKRGTTSQYFSSVGDYVNGSKTNISDD
FT                   DLTANYLFKNAATKSTKKTKSIYNVAQLAGSIE"
XX
SQ   Sequence 768 BP; 253 A; 127 C; 160 G; 228 T; 0 other;

jf718285 Length: 768  01-MAY-2011  Type: N  Check: 5999  ..

       1  atggatcctc atggaaatcc gatcgtggaa cctgagtcaa gtaactcccc
      51  tgaatctgca ggtgtgtcat ttactgattc acaaaaacct cctgtagatc
     101  ggaaagtaaa agatgactcg tacaatttag atctcttgat ctccaatgtt
     151  gggagacggg atgatattat atctcctgat gatatgagtc ttgacaaact
     201  ttcaaagatt caggttagag cagacagagg agatgtcttg aatgatgaag
     251  ataaattaat ctttgaaggt tgtttgaaga acttttgcaa aagattgact
     301  ggagttgatc cagatcctga gacctttctt gggttcttca tgagtgtagc
     351  tcaaatgtca ttaaatcaat ctacttctgt taaaaacaga aagaatctcc
     401  agttgaagaa ttatttaaaa ataggagata aagaatatat ttggaagacc
     451  gccgacttgt tgaattactt gtctggacag tttccgaata agagtaatcc
     501  actgagacaa tatatgagat tgtgcgaaaa tcaaattgaa atgctgaaat
     551  cttctggtaa gatagtcagt gatggtcatc tcgctgccaa acgtggtacg
     601  acctctcagt atttctcgtc agtcggagat tatgtcaatg gttcgaaaac
     651  caacatttct gatgatgatt tgactgcaaa ttacctgttc aagaatgcag
     701  caactaagag tactaagaag acaaaatcaa tttataatgt cgctcaatta
     751  gcaggatcta ttgagtag