Sequence of DPV Ageratum enation virus
Ageratum enation virus clone Age 3, complete genome.
ACC No: JF728861
Dated: 2012-02-05 | Length: 2748 | CRC: 213564458
ID JF728861; SV 1; circular; genomic DNA; STD; VRL; 2748 BP.
XX
AC JF728861;
XX
DT 27-JUL-2011 (Rel. 109, Created)
DT 05-FEB-2012 (Rel. 111, Last updated, Version 2)
XX
DE Ageratum enation virus clone Age 3, complete genome.
XX
KW .
XX
OS Ageratum enation virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2748
RA Kumar J., Tuli R.;
RT "Ageratum enation virus causing yellowing and leaf curling";
RL Unpublished.
XX
RN [2]
RP 1-2748
RA Kumar J., Tuli R.;
RT ;
RL Submitted (25-MAR-2011) to the INSDC.
RL Agri-Biotechnology, National Agri-Food Biotechnology Institute, India,
RL C-127, Phase-8, Mohali, Punjab 160071, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2748
FT /organism="Ageratum enation virus"
FT /host="Ageratum conyzoides"
FT /isolate="Mohali"
FT /mol_type="genomic DNA"
FT /country="India"
FT /collection_date="25-Jul-2010"
FT /clone="Age 3"
FT /db_xref="taxon:188333"
FT gene 133. .480
FT /gene="AV2"
FT CDS 133. .480
FT /codon_start=1
FT /gene="AV2"
FT /product="pre-coat protein"
FT /db_xref="GOA:G1C2N7"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:G1C2N7"
FT /protein_id="AEK78865.1"
FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL
FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGQQAHEQ
FT KAQDVQDVQKS"
FT gene 293. .1063
FT /gene="AV1"
FT CDS 293. .1063
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:D1GV12"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:D1GV12"
FT /protein_id="AEK78866.1"
FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR
FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(1060. .1464)
FT /gene="REn"
FT CDS complement(1060. .1464)
FT /codon_start=1
FT /gene="REn"
FT /product="replication enhancer protein"
FT /db_xref="GOA:G1C2K9"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:G1C2K9"
FT /protein_id="AEK78867.1"
FT /translation="MDSRTGELITAAQAENGVYIWEIQNPLYFKITEHQNRPFLMKEDI
FT MTVQIQFNYNLRKALGVHKCFLIYRIWMTSQPQTGRFLRVFKTQVLKYLNNLGVISINN
FT VIRSVDHVLWDVLEHIVYVEQSYSIKFNIY"
FT gene complement(1205. .1609)
FT /gene="TrAP"
FT CDS complement(1205. .1609)
FT /codon_start=1
FT /gene="TrAP"
FT /product="transcription activator protein"
FT /db_xref="GOA:G1C2K4"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:G1C2K4"
FT /protein_id="AEK78868.1"
FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGIRRRRVDLPCGCTYFIALA
FT CHNHGFTHRGTHHCSSSREWRVYLGDSKSPLFQDNRAPEPSISHERRHHDRPNTIQLQP
FT EESSGSAQMFSNLPNLDDFTASDWSFLKGL"
FT gene complement(1512. .2597)
FT /gene="AC1"
FT CDS complement(1512. .2597)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /note="initiation of rolling circle"
FT /db_xref="GOA:G1C2L1"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:G1C2L1"
FT /protein_id="AEK78869.1"
FT /translation="MAPPKRFQIYAKNFFLTYPHCSLTKEEALSQIQDLQTPVNKKYIK
FT ICRELHENGEPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSTDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIREKLPEKFIFQYH
FT NLNSNLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMVAAARPLRPQSIVIEGD
FT SRTGKTLWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGRNSSYKEFLDEEKNNALRNWALKNAIFVTLEGPL
FT YSGSNQSAAQASQEGDQASTC"
FT gene complement(2183. .2440)
FT /gene="AC4"
FT CDS complement(2183. .2440)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:E1V2J2"
FT /protein_id="AEK78870.1"
FT /translation="MGNLIFTCLSSSKENTNAKITDSSTWYPQPDQHISIRTFRELNPA
FT PTSSPTSTRTETPSNGENSRSMEDLHEEVNRQLMMLLQKP"
XX
SQ Sequence 2748 BP; 753 A; 522 C; 614 G; 859 T; 0 other;
jf728861 Length: 2748 05-FEB-2012 Type: N Check: 1036 ..
1 accggatggc cgcgattttt ttaaagtggg cccctgacaa agacatgtcc
51 accaatctaa atcgtcgctc aaagcttaat tgttttgtgg tcccttattt
101 atacttgctc agcaagtagt gcactccgta ctatgtggga tccattagtt
151 aacgagtttc ccgaaaccgt tcacggtttt aggtgtatgt tagcagttaa
201 atatctgcag ttagtagaga agacttattc gcctgacaca ttagggcacg
251 atttaattag ggatttaatt tcagttatta gggctagaaa ttatgtcgaa
301 gcgaccagca gatataatca tttccacgcc cgcttcgaag gtacgccgcc
351 gtctcaactt cgacagccca tatgtgagcc gtgctgctgc ccccattgtc
401 cgcgtcacca aagcaagagc atgggccaac aggcccatga acagaaagcc
451 caggatgtac aggatgtaca gaagtcctga tgtccctaga ggatgtgaag
501 gtccatgtaa ggtccagtct tttgagtcta gacatgacat tcagcatata
551 ggtaaggtta tgtgtgtcag tgatgttacg cgtggaactg ggctgactca
601 tcgagtgggt aaaaggtttt gtgttaaatc cgtttatgtc ttgggtaaga
651 tctggatgga tgaaaatatt aagacgaaga accacactaa cagtgttatg
701 ttttttttag ttagagatcg taggcctgtg gataaacctc aagattttgg
751 agaggttttt aacatgtttg ataatgagcc cagtacggct actgtgaaga
801 atgttcatcg tgataggtat caagtgcttc ggaaatggca tgcaactgtt
851 acgggtggac aatatgcgtc aaaggaacag gctcttgtga agaagtttgt
901 tagggttaat aattatgttg tgtataacca gcaagaagct ggcaagtatg
951 aaaatcattc tgagaatgcg ttaatgttgt atatggcatg tactcatgcc
1001 tctaacccag tgtatgctac tttgaagata cggatctatt tctatgattc
1051 cgtaacaaat taataaatat taaattttat tgaatatgat tgttctacat
1101 atacaatgtg ttctaataca tcccataaaa catgatcaac tgatctgatt
1151 acattattaa tactgataac tcctaaatta tttaaatatt ttaaaacttg
1201 agtcttaaag acccttaaga aacgaccagt ctgaggctgt gaagtcatcc
1251 agattcggta gattagaaaa catttgtgca ctcccagagc tttcctcagg
1301 ttgtagttga attgtatttg gacggtcatg atgtcttctt tcatgagaaa
1351 tggacggttc tggtgctctg ttatcttgaa ataaagggga ttttgaatct
1401 cccagatata cacgccattc tctgcttgag ctgcagtgat gagttcccct
1451 gtgcgtgaat ccatggttgt ggcaggctaa tgctatgaag tatgtacacc
1501 cacaagggag atcaacacgt cgacgcctga tccccttctt ggctagcctg
1551 tgctgcactt tgattggaac ctgagtagag tgggccttcg agggtgacga
1601 agatcgcatt ctttaaagcc caatttctga gtgcattatt cttctcttca
1651 tccaagaact ctttataact tgaattacgt cctggattgc agaggaagat
1701 agtgggaatt ccgcctttaa tttgaactgg ctttccgtat ttggtatttg
1751 attgccagtc cctttgggcc cccatgaatt ctttaaagtg ctttaggtag
1801 tggggatcta cgtcatcgat gacgttatac cacgcatcat tactgtaaac
1851 tttggggctt agatctaaat gaccgcatag gtaattatga ggccctaatg
1901 acctagccca caacgtttta cccgtacgac tgtcaccttc aattactata
1951 ctttgaggcc tcagaggccg cgcagcggca accatgacat tttctgagac
2001 ccattcttca agttcttcag gaacttgatc aaaagaagaa gataaaaaag
2051 gcgaaacata aacctccaac ggaggagtaa aaatcctatc taaattagaa
2101 tttaaattat gatattgaaa aataaatttt tctgggagtt tctcccttat
2151 tatagccatt gcagcttctt tagagcctgc atttagggct tctgcagcag
2201 catcattagc tgtctgttga cctcctcgtg cagatcttcc atcgatctgg
2251 aattctcccc attcgagggt gtctccgtcc ttgtcgatgt aggacttgac
2301 gtcggtgctg gatttagctc cctgaatgtt cggatggaaa tgtgctgatc
2351 tggttgggga taccaggtcg aagaatctgt tattttggca tttgtatttt
2401 ccttcgaact ggataagcac gtgaagatga ggttccccat tttcgtgaag
2451 ctctctgcag attttgatat attttttgtt tactggggtt tgtaggtctt
2501 ggatttggga aagtgcttct tctttagtaa gagagcagtg tggataagtg
2551 agaaagaaat ttttggcata tatttgaaat cgttttggag gagccattga
2601 cttggtcaat cggtactcag ctctagtctt atgtcaattg gtgatcagta
2651 ctcaatatat agtgagtacc gaatggcatt attcgtaatt ttgaaaagaa
2701 attcaaaatt caaatttgaa atccaaaagc ggccatccgt ataatatt