Sequence of DPV Euphorbia yellow mosaic virus
Euphorbia yellow mosaic virus - Goias [Brazil:GO:Sao Miguel do Passa Quatro AB404:2002] segment DNA-A, complete sequence.
ACC No: JF756675
Dated: 2011-05-04 | Length: 2610 | CRC: -1090921035
ID JF756675; SV 1; linear; genomic DNA; STD; VRL; 2610 BP.
XX
AC JF756675;
XX
DT 04-MAY-2011 (Rel. 108, Created)
DT 04-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE Euphorbia yellow mosaic virus - Goias [Brazil:GO:Sao Miguel do Passa Quatro
DE AB404:2002] segment DNA-A, complete sequence.
XX
KW .
XX
OS Euphorbia yellow mosaic virus - Goias [Brazil:GO:Sao Miguel do Passa Quatro
OS AB404:2002]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2610
RA Fernandes F.R., Albuquerque L.C., Oliveira C.L., Cruz A.R.R., Rocha W.B.,
RA Pereira T.G., Naito F.Y.B., Dias N.M., Nagata T., Faria J.C., Zerbini F.M.,
RA Aragao F.J.L., Inoue-Nagata A.K.;
RT "Molecular and biological characterization of a new Brazilian begomovirus,
RT Euphorbia yellow mosaic virus (EuYMV), infecting Euphorbia heterophylla
RT plants";
RL Unpublished.
XX
RN [2]
RP 1-2610
RA Fernandes F.R., Albuquerque L.C., Oliveira C.L., Cruz A.R.R., Rocha W.B.,
RA Pereira T.G., Naito F.Y.B., Dias N.M., Nagata T., Faria J.C., Zerbini F.M.,
RA Aragao F.J.L., Inoue-Nagata A.K.;
RT ;
RL Submitted (31-MAR-2011) to the EMBL/GenBank/DDBJ databases.
RL Phytopathology, Embrapa Vegetables, Rod. Brasilia/Anapolis BR 060 Km 09
RL Gama - DF, Gama, Federal District 70359-970, Brazil
XX
FH Key Location/Qualifiers
FH
FT source 1. .2610
FT /organism="Euphorbia yellow mosaic virus - Goias
FT [Brazil:GO:Sao Miguel do Passa Quatro AB404:2002]"
FT /segment="DNA-A"
FT /host="Euphorbia heterophylla"
FT /mol_type="genomic DNA"
FT /country="Brazil:Sao Miguel do Passa Quatro, Goias"
FT /collection_date="2002"
FT /clone="AB404"
FT /db_xref="taxon:1016878"
FT CDS 206. .955
FT /codon_start=1
FT /product="AV1"
FT /note="coat protein"
FT /protein_id="AED02010.1"
FT /translation="MPKRDAPWRLMTGTSKVSRNVNYSPRGGPKIDKASSWVNRPMYRK
FT PRIYRMYRGPDVPKGCEGPCKVQSYESRHDVSHVGKVICVSDVTRGNGITHRVGKRFCV
FT KSVYILGKIWMDETIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKN
FT DLRDRFQVMHKFYAKVTGGQYASNEQAIVKRFWKVNNYVVYNHQEAGKYENHTENALLL
FT YMACTHASNPVYATLKIRIYFYDSITN"
FT CDS complement(952. .1350)
FT /codon_start=1
FT /product="AC3"
FT /note="replication enhancer protein; REn"
FT /protein_id="AED02013.1"
FT /translation="MDLSTGEFITVSQAENSVFIWEVPNPLYFKIIGVEDPIYTSLRIY
FT HIQIRFNYNLRRALNLRKAFLNFQVWTTSIRASGMTYLSRFRHLVLMYLDQLGVVGLNH
FT VIRAVRFATDRSYVNDVLENHEIKFNFY"
FT CDS complement(1097. .1486)
FT /codon_start=1
FT /product="AC2"
FT /note="transcriptional activator protein; TrAP"
FT /protein_id="AED02012.1"
FT /translation="MLNSSSSTPPSIKAQHRAAKRRAIRRRRIDLNCGCSIFLHIDCAD
FT YGFKHRGVHHCVSGREFRFYLGGSKSPLFQDHRGGGPDIHVTPDIPHPDPVQLQPQEGT
FT ESTQSFPELPSLDDIDSSFWDDLFK"
FT CDS complement(1398. .2552)
FT /codon_start=1
FT /product="AC1"
FT /note="replication-associated protein; Rep"
FT /protein_id="AED02011.1"
FT /translation="MGHQDTTKNRFLRGLPLVSWLIFSIMPRNSNSFRLTAKNIFLTYP
FT RCDIPKDEVLQLLRDLPWAVVKPTYIRVARELHADGFPHLHCLIQLSGKSNIKDAKFFN
FT LTHPRRSAEFHPNAQSAKDANAVKNYITKEGDYCESGQYKVSGGSKSNKDDVYHNAVNA
FT ATAGEALDIIRAGDPKTFIVNYHNVKANVERLFIKPPLPWVPPFQLSSFTNVPSDLQEW
FT ADDYFGRGAAARPDRPISIVVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNDVEY
FT NVIDDVAPHYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDF
FT LNKEENASLRAWTRKNAKFIFLHAPLYQSTAPSCQEESYTSTTD"
FT CDS complement(2036. .2398)
FT /codon_start=1
FT /product="AC4"
FT /protein_id="AED02014.1"
FT /translation="MKFCSCFGTCHGLSSSRRTSESLESSTPMGSPISTVLFNSPASPT
FT SRMLSFSTSLTPDGLPNFTQMRNRPRTPTPSKITSPKRVIIVNPANIRCLGVPSPIKMT
FT STTTLSMQQLQERLST"
XX
SQ Sequence 2610 BP; 701 A; 588 C; 627 G; 694 T; 0 other;
jf756675 Length: 2610 04-MAY-2011 Type: N Check: 8384 ..
1 accggatggc cgcgattttt tggtgtcctc tatcccggcc caggcccaaa
51 cgcatttagt tttatccggg accacacaca tcaactaaaa ctgaccaatc
101 acatcaatgc tgacgagtct atataacttt gagcctactt ggccgataag
151 ttgtggtccc tatatattta aaataattga cattattcga tatctttaat
201 ttgaaatgcc taagcgagat gccccatggc gattaatgac ggggacctct
251 aaggtcagtc gtaatgtcaa ttattcgccc cgtggtggtc ctaagataga
301 caaggcctct tcatgggtga acaggcccat gtacaggaag cccaggatct
351 atcgcatgta tagaggccca gatgttccga agggatgtga agggccttgt
401 aaagtccagt catacgagtc tcgtcatgac gtttcccatg ttgggaaagt
451 gatatgtgta tccgatgtga cacggggcaa tggtattacg catcgtgtgg
501 gcaagcgttt ctgcgtcaag tctgtgtaca ttctagggaa gatctggatg
551 gatgagacca tcaagttgaa gaaccacacg aatagcgtca tgttctggtt
601 ggtgcgagat cgtcgaccat atggcactcc tatggatttt ggccaggtgt
651 tcaacatgtt cgacaacgaa cccagtacag ctaccgtgaa gaacgatctc
701 cgcgatcgct tccaagtgat gcacaagttt tacgcgaagg tcactggtgg
751 acaatatgcg agcaacgagc aggcgatcgt caagcgtttt tggaaggtca
801 ataactatgt ggtgtataac caccaagagg cagggaaata cgagaatcat
851 acggagaacg cgttactatt gtatatggca tgtactcatg cctctaatcc
901 tgtatatgcg acgttgaaaa ttcggatcta tttttatgat tcgataacaa
951 attaataaaa attgaatttt atttcatgat tctcgagtac atcatttaca
1001 tatgagcgat cagttgcgaa acgaacagcc ctaattacat gattaagacc
1051 tacgacaccc aattgatcta aatacattaa aactaaatgc ctgaatctac
1101 ttaaataagt catcccagaa gctcgaatcg atgtcgtcca gacttggaag
1151 ttcaggaaag ctttgcgtag attcagtgcc ctcctgaggt tgtaattgaa
1201 ccggatctgg atgtggtata tccggagtga cgtgtatatc gggtcctcca
1251 ccccgatgat cttgaaatag aggggatttg gaacctccca aataaaaacg
1301 gaattctctg cctgagacac agtgatgaac tccccggtgc ttaaatccat
1351 aatctgcaca gtcgatatgg agaaatatgg aacagccgca gttcaagtca
1401 atccgtcgtc gacgtatagc tctcctcttg gcagctcggt gctgtgcttt
1451 gatagagggg ggcgtggagg aagatgaatt tagcattctt gcgtgtccaa
1501 gctctcaacg atgcattctc ctctttgttg aggaagtctt tatagctagc
1551 cccctcgcct ggattgcaca gcacgattga tggtatcccg cctttaattt
1601 gaaccggctt tccatattta cagttggact gccagtccct ttgggcccca
1651 atcaactctt tccaatgctt taactttaga taatgcggag cgacatcatc
1701 aatgacgtta tactccacgt catttgagta aaccctagaa ttgaaatcga
1751 gatgcccact aagataatta tgtgggccta aagctctagc ccacatggtc
1801 ttacccgttc gactatcccc ctcgactaca atactaatag gtctatctgg
1851 ccgcgcagcg gcaccccttc caaaataatc atcagcccac tcttgcaaat
1901 cagacgggac attggtaaat gacgacagct gaaaaggagg aacccaagga
1951 aggggtggct taatgaagag gcgctcgacg ttagctttga cgttatgata
2001 attcacgatg aacgtcttcg gatcaccagc ccttattatg tcgagagcct
2051 ctcctgcagt tgctgcattg acagcgttgt ggtagacgtc atctttattg
2101 gacttggaac ccccagacac cttatattgg ccggattcac aataatcacc
2151 ctctttggtg atgtaatttt tgacggcgtt ggcgtccttg gccgattgcg
2201 catttgggtg aaattcggca gaccgtctgg ggtgagtgag gttgaaaaac
2251 ttagcatcct tgatgttgga cttgccggag agttgaataa gacagtggag
2301 atgggggaac ccatcggcgt ggagctctcg agcgactcgg atgtacgtcg
2351 gcttgacgac agcccatggc aagtcccgaa gcaactgcag aacttcatct
2401 ttcggaatat cgcaccgggg ataagtgagg aatatatttt tggccgttag
2451 gcgaaatgaa ttagagttcc gtggcataat tgaaaatata agccaggaca
2501 ccagggggag tcctctcaaa aacctatttt tcgtggtgtc ctggtgtccc
2551 atttatacta aaagcctcta ggacaccagg ggggtacgtg gcggccatcc
2601 gtataatatt