Sequence of DPV Sweet potato leaf curl virus
Sweet potato leaf curl virus isolate MG segment DNA-A, complete sequence.
ACC No: JF768740
Dated: 2011-08-07 | Length: 2827 | CRC: -2014632527
ID JF768740; SV 1; circular; genomic DNA; STD; VRL; 2827 BP.
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AC JF768740;
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DT 07-AUG-2011 (Rel. 109, Created)
DT 07-AUG-2011 (Rel. 109, Last updated, Version 1)
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DE Sweet potato leaf curl virus isolate MG segment DNA-A, complete sequence.
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KW .
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OS Sweet potato leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2827
RA Zulfiqar A., Zhang J., Zhou X., Xie Y.;
RT "Molecular characterization of two isolates of sweet potato leaf curl virus
RT (SPLCV) infecting Ipomoea indica in China";
RL Unpublished.
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RN [2]
RP 1-2827
RA Zulfiqar A., Zhang J., Zhou X., Xie Y.;
RT ;
RL Submitted (03-APR-2011) to the INSDC.
RL Key Laboratory of Molecular Biology of Crop Pathogens and Insects,
RL Institute of Biotechnology, Zhejiang University, Kaixuan Road # 268,
RL Hangzhou, Zhejiang 310029, China
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FH Key Location/Qualifiers
FH
FT source 1. .2827
FT /organism="Sweet potato leaf curl virus"
FT /segment="DNA-A"
FT /host="Ipomoea indica"
FT /isolate="MG"
FT /mol_type="genomic DNA"
FT /country="China"
FT /collection_date="18-Aug-2010"
FT /PCR_primers="fwd_seq: ccctaaggttcctggctcgtatttc, rev_seq:
FT ctatcgtgccctacactgggaatgc"
FT /db_xref="taxon:100755"
FT CDS 125. .469
FT /codon_start=1
FT /product="AV2 protein"
FT /protein_id="AEL22948.1"
FT /translation="MAELWDPLQNPLPDTLYGFRCMLSVKYLQGILKKYEPGTLGFELC
FT SELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGF
FT KRRPDEEKEG"
FT CDS 294. .1058
FT /codon_start=1
FT /product="AV1 protein"
FT /protein_id="AEL22949.1"
FT /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV
FT PVSRGVRMKRRRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK
FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQIFTMYDNEPTTA
FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLE
FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN"
FT CDS complement(1074. .1508)
FT /codon_start=1
FT /product="AC3 protein"
FT /protein_id="AEL22950.1"
FT /translation="MDSRTGESLSHAQTTRALEFDTNPMSVGRTAPFHLRMMYVHESAQ
FT GRTILKFKLRVNYRERRQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNELAN
FT LGFFSLVNLVFVIRYLPRVCSWIDEVDTVDCNDDVKVLLY"
FT CDS complement(1225. .1671)
FT /codon_start=1
FT /product="AC2 protein"
FT /protein_id="AEL22951.1"
FT /translation="MSNPLSGYKRKCPIQEPLHTEAKKAKRKVPEQRTRIVWKGCGCSA
FT FITTACKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTIPPQNDVCPRERTGENYP
FT QIQAEGQLQGKEATGIPQDLPPIPDLDDPSNWCYSQLDWYFGTP"
FT CDS complement(1580. .2674)
FT /codon_start=1
FT /product="AC1 protein"
FT /protein_id="AEL22952.1"
FT /translation="MAPPKRFKIQAKNYFITYPRCSLSKEDCLAQLLNIQTPTNKKYIH
FT VARELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPNRSNHFHPNIQGAKSSSDVKSYV
FT DKDGDTITWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQFH
FT NLVSNLDRIFTPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDAAARPDRPISIVIEGP
FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW
FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF
FT WVQEEVSHSGATAHRGEEGQEESS"
FT CDS complement(2260. .2517)
FT /codon_start=1
FT /product="AC4 protein"
FT /protein_id="AEL22953.1"
FT /translation="MGNLTSMCWCSSKANSSAQIADSSIWSHRTDRITFTPTSRELNPR
FT PMSSPTLTRTGIPSPGVNSRSTADLLEEASRLLMTQPQRL"
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SQ Sequence 2827 BP; 737 A; 601 C; 685 G; 804 T; 0 other;
jf768740 Length: 2827 07-AUG-2011 Type: N Check: 6472 ..
1 accggtgccc gccgcgccct taaaaagtgg gccccactag gggaacacgc
51 gtcttttccg tactctcttt aatgatgacc ttgctttata aggaccaatc
101 aggtttcgcc cttggcgccc aagtatggct gaattgtggg atcctttgca
151 gaacccactc ccagatactt tatacggttt taggtgtatg ctatccgtaa
201 aatacttgca gggtattttg aagaaatacg agccaggaac cttagggttc
251 gagctctgtt cggagttaat ccgtatattc agagtcaggc agtatgacag
301 ggcgaattcc cgtttcgcgg agatttcatc cctatggggg gagaccggta
351 agacggaggc tgaacttcga gacagctatc gtgccctaca ctgggaatgc
401 tgtcccaatt gctgcccgaa gctatgtccc ggtttcaaga ggcgtccgga
451 tgaagagaag gaggggtgac cgcatcccga agggatgtgt gggtccctgt
501 aaggtccagg actatgagtt caagatggac gttccccaca cgggaacgtt
551 tgtctgtgtc tcggatttta caaggggtac tgggcttacc catcgcctgg
601 gtaagcgtgt ttgtgtgaag tccatgggta tagatgggaa ggtctggatg
651 gatgacaatg tggccaagag agatcacacc aatatcatca cgtattggtt
701 gattcgtgac aggaggccca ataaggatcc gctgaacttt ggccagatct
751 ttaccatgta cgacaatgag cccactactg ctaagatccg aatggatctg
801 agggatagaa tgcaggtctt gaagaagttt tctgttacag tttcaggagg
851 tccatacagc cacaaggagc aggccttaat taggaagttt tttaagggtt
901 tgtataatca tgttacttac aatcacaagg aagaagctaa gtatgagaat
951 caattagaga atgcacttat gttgtatagt gctagtagtc atgctagtaa
1001 tcctgtgtat cagaccctgc gttgcagggc ttatttctat gattcgcaca
1051 ataattaata aaattatatt ttattaatag agtaatacct ttacatcatc
1101 attacaatct acagtatcta cttcatctat ccaagaacac actcttggaa
1151 gatatctaat aacaaaaact aaattaacta aactaaaaaa acctaaattt
1201 gctaattcat tacatatacg ccatttaagg cgttccaaaa taccagtcca
1251 actgtgaata gcaccagtta gacgggtcgt caagatccgg aattggagga
1301 agatcttgtg gaatcccagt tgcctccttt ccctgtagtt gaccctcagc
1351 ttgaatttga ggatagttct cccctgtgcg ctctcgtgga catacatcat
1401 tctgaggtgg aatggtgcag tccgacccac agacatgggg ttggtgtcga
1451 attcgagtgc tctcgtagtc tgagcatgac ttagtgattc ccctgtgcgt
1501 gaatccatgc tggtacttgc aggctgtggt gatgaaggct gaacagccgc
1551 aacccttcca cactatcctt gtcctctgtt caggaacttt cctcttggcc
1601 ttcttcgcct ctgtgtgcag tggctcctga atgggacact tcctcttgta
1651 cccagaaagg ggattggaca tcgcagaata tagcgtttgc tgttgcccaa
1701 ttctttagtg ctccttgctc tggtttgtcc aaccagagtt taaatgagga
1751 gccctctcct ggattgcaga ggaagattgt gggaattcca cctttaattt
1801 gaactggctt tccgtattta cagttggatt gccagtcctt ctgggccccc
1851 atgaattcct taaagtgctt taggtattgg ggattgacgt catcaatgac
1901 gttataccaa gcactgttgc tgtatacttt tgggcttaga tctaaatgcc
1951 cacacaaata attgtgaggg cccaaagacc tggcccatac tgttttgcct
2001 attctgcttg ggccttcaat aacaatggat atgggtctat ccggccgcgc
2051 agcggcatcc atgacatttt cagcggccca gtcgctgata atgtcaggaa
2101 cagcattgaa agaagaagaa gaaaaagggg aagaatatac agaaggagga
2151 ggagtaaaaa tcctatctaa attagaaact aaattatgaa attgaaatag
2201 atatttttca gggagtttct ccctgattat ttgcaacgca gcttctttag
2251 aacctgcgtt tagagcctct gcggctgcgt cattagcagt ctgctggcct
2301 cctctagcag atctgccgtc gacctggaat tcaccccagg tgatggtatc
2351 cccgtccttg tcaacgtagg acttgacatc ggacgaggat ttagctccct
2401 ggatgttggg gtgaaagtga ttcgatctgt tcggtgagac cagatcgaag
2451 aatctgctat ttgtgcagac gaatttgcct tcgaactgca ccagcacatg
2501 gaggtgaggt tccccatcct cgtgcagttc tcttgctacg tgtatgtatt
2551 ttttattggt gggtgtttgg atatttagga gttgggctag gcagtcctct
2601 tttgagagag aacagcgtgg ataagtaata aaataatttt tggcctgaat
2651 tttaaaacgt tttggaggag ccatttggag acacgcataa gttcaaatga
2701 attggagact ggagacaata tatagtatgt ctccaaatgg cattctggta
2751 atttagaaga tccttttagc tttaattcaa attccgacaa ctctgggtcc
2801 acaaaaggcg ggcaccgtat taatatt