Sequence of DPV Blueberry red ringspot virus

Blueberry red ringspot virus isolate BRRSV03 cell-to-cell movement protein gene, complete cds.

ACC No: JF920968

Dated: 2011-12-07 | Length: 936 | CRC: 1592330071

                
ID   JF920968; SV 1; linear; genomic DNA; STD; VRL; 936 BP.
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AC   JF920968;
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DT   18-OCT-2011 (Rel. 110, Created)
DT   07-DEC-2011 (Rel. 111, Last updated, Version 2)
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DE   Blueberry red ringspot virus isolate BRRSV03 cell-to-cell movement protein
DE   gene, complete cds.
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KW   .
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OS   Blueberry red ringspot virus
OC   Viruses; Retro-transcribing viruses; Caulimoviridae; Soymovirus.
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RN   [1]
RP   1-936
RA   Kalinowska E., Paduch-Cichal E., Chodorska M.;
RT   "Genetic diversity in the movement protein coding region among Blueberry
RT   red ringspot virus (BRRSV) isolates";
RL   Unpublished.
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RN   [2]
RP   1-936
RA   Kalinowska E., Paduch-Cichal E., Chodorska M.;
RT   ;
RL   Submitted (07-MAY-2011) to the INSDC.
RL   Department of Plant Pathology, Warsaw University of Life Sciences
RL   WULS-SGGW, Nowoursynowska 166, Warsaw 02-787, Poland
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FH   Key             Location/Qualifiers
FH
FT   source          1. .936
FT                   /organism="Blueberry red ringspot virus"
FT                   /host="Vaccinium corymbosum cv. Darrow (highbush
FT                   blueberry)"
FT                   /isolate="BRRSV03"
FT                   /mol_type="genomic DNA"
FT                   /country="Poland"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:172220"
FT   CDS             1. .936
FT                   /codon_start=1
FT                   /product="cell-to-cell movement protein"
FT                   /db_xref="UniProtKB/TrEMBL:G4XZE9"
FT                   /protein_id="AEQ38573.1"
FT                   /translation="MKQMIIMGVDVQLERSKLKQIAKEGKLTLKSGQGIKSEGFLPSIT
FT                   RKNILYLGKFTSEQPLEISTAVGQEALSLVNGKQIADRIAKMKQSDKEKIQYIHLSTIQ
FT                   ILVKSTYASIDTPMDIIVIDNRIISKNKKEQVLGIIKGNLKYGVIKFDVSLHFAIPLVT
FT                   KNLSQSIGILYKFHRQDLMEKGDYPLSITYSVGYALSNSHHSVDYIDQEIIHIDDLFKN
FT                   TSTKLVTFEKKNENANDIFRAPPVRMIKPREDISKPTITDVTDPLKPTTSSSIQLAPPP
FT                   NLHRKPESMQNLEKQIQELRRTVTNLNEKI"
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SQ   Sequence 936 BP; 418 A; 146 C; 142 G; 230 T; 0 other;

jf920968 Length: 936  07-DEC-2011  Type: N  Check: 8880  ..

       1  atgaaacaaa tgattattat gggagtcgat gtccaactag aaagatctaa
      51  gttaaaacaa atagcaaaag aaggaaaatt aacattaaaa tcaggacaag
     101  gaataaaatc agaaggattt ttaccatcta ttactagaaa gaatatatta
     151  tatttaggaa aattcacaag cgagcaacca ttagaaatta gcacagcagt
     201  aggacaagaa gccttatcat tagttaatgg aaagcaaata gcagacagaa
     251  tagcaaaaat gaaacaatca gataaagaaa agatacagta tatacaccta
     301  agtacaatac aaatattagt taaatctacc tatgcctcaa tagatacacc
     351  catggatatt atagttattg ataatagaat aatttctaaa aataagaaag
     401  aacaagttct aggaataatt aaaggaaatc tgaaatatgg agttattaag
     451  tttgacgtaa gtttacactt cgccatacca ttagtaacta agaatttaag
     501  tcaatctata ggaatattat ataaatttca tagacaagat ctgatggaaa
     551  aaggagatta cccacttagt atcacctact ccgtaggata tgcattaagc
     601  aatagtcacc atagtgttga ttatatagat caagagatta tccatataga
     651  tgacctattt aaaaatacca gtactaagct agtaacattc gaaaagaaga
     701  atgaaaacgc taacgatata tttagagcac caccagtaag aatgattaag
     751  cctagagagg atatatcaaa accaacaata acagatgtca ctgacccatt
     801  aaaaccaacc actagtagtt ctatccaact agcacctcca cctaacttac
     851  atagaaaacc agaaagtatg cagaacctag aaaagcaaat acaagaatta
     901  agaaggaccg ttacaaacct caatgaaaaa atatga