Sequence of DPV Blueberry red ringspot virus

Blueberry red ringspot virus isolate BRRSV13 cell-to-cell movement protein gene, complete cds.

ACC No: JF920969

Dated: 2011-12-07 | Length: 936 | CRC: -326694551

                
ID   JF920969; SV 1; linear; genomic DNA; STD; VRL; 936 BP.
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AC   JF920969;
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DT   18-OCT-2011 (Rel. 110, Created)
DT   07-DEC-2011 (Rel. 111, Last updated, Version 2)
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DE   Blueberry red ringspot virus isolate BRRSV13 cell-to-cell movement protein
DE   gene, complete cds.
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KW   .
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OS   Blueberry red ringspot virus
OC   Viruses; Retro-transcribing viruses; Caulimoviridae; Soymovirus.
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RN   [1]
RP   1-936
RA   Kalinowska E., Paduch-Cichal E., Chodorska M.;
RT   "Genetic diversity in the movement protein coding region among Blueberry
RT   red ringspot virus (BRRSV) isolates";
RL   Unpublished.
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RN   [2]
RP   1-936
RA   Kalinowska E., Paduch-Cichal E., Chodorska M.;
RT   ;
RL   Submitted (07-MAY-2011) to the INSDC.
RL   Department of Plant Pathology, Warsaw University of Life Sciences
RL   WULS-SGGW, Nowoursynowska 166, Warsaw 02-787, Poland
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FH   Key             Location/Qualifiers
FH
FT   source          1. .936
FT                   /organism="Blueberry red ringspot virus"
FT                   /host="Vaccinium corymbosum cv. Darrow (highbush
FT                   blueberry)"
FT                   /isolate="BRRSV13"
FT                   /mol_type="genomic DNA"
FT                   /country="Poland"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:172220"
FT   CDS             1. .936
FT                   /codon_start=1
FT                   /product="cell-to-cell movement protein"
FT                   /db_xref="UniProtKB/TrEMBL:G4XZF0"
FT                   /protein_id="AEQ38574.1"
FT                   /translation="MKQMIIMGVDVQLERSKLKQIAKEGKLTLKSGQGIKSEGFLPSIT
FT                   RKNILYLGKFTSEQPLEISTAVGQEALSLVNGKQIADRIAKMKQSDKEKIQYIHLSTIQ
FT                   ILVKSTYASIDTPMDIIVIDNRIISKNKKEQVLGIIKGNLKYGVIKFDVSLHFAIPLVT
FT                   KNLSQSIGILYKFHRQDLMEKGDYPLSITYSVGYALSNSHHSVDYIDQEIIHIDDLFKN
FT                   TSTKLVTFEKKNENANDIFKAPPVRMIKPREDISKPTITDVTDPLRPTTSSSIQLAPPP
FT                   NLHRKPESMQNLEKQIQELRRTVTNLNEKI"
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SQ   Sequence 936 BP; 415 A; 158 C; 143 G; 220 T; 0 other;

jf920969 Length: 936  07-DEC-2011  Type: N  Check: 3431  ..

       1  atgaaacaaa tgattattat gggagtcgat gtccaactag aaagatctaa
      51  actaaaacaa atagcaaaag aaggaaagtt aacattaaaa tcaggacaag
     101  gaataaaatc agaaggattc ttaccatcta ttactagaaa gaatatatta
     151  tatttaggaa aatttacaag cgagcaacca ttagaaatta gcacagcagt
     201  aggacaagaa gccttatcat tagttaacgg aaagcaaata gcagacagaa
     251  tagcgaaaat gaaacaatca gataaagaaa agattcagta tatacacttg
     301  agcacaatac agatattagt taaatccacc tatgcctcaa tagatacacc
     351  catggatatt atagttattg ataatagaat aatttctaaa aataagaaag
     401  aacaagttct aggaataatt aaaggaaatc taaaatatgg agttattaag
     451  tttgacgtaa gtttacactt cgccatacca ttagtaacta agaatttaag
     501  ccaatctata ggaatattat acaaattcca cagacaagat ctgatggaaa
     551  aaggagatta cccacttagt atcacctact ctgtaggata tgcattaagc
     601  aatagtcacc atagtgttga ttatatagat caagagatca tacatataga
     651  tgacctattc aaaaatacca gtactaaact agtaacgttc gaaaagaaga
     701  atgaaaacgc taacgatata tttaaagcac caccagtcag aatgatcaag
     751  cctagagagg atatatcaaa accaacaata acagatgtca ctgacccatt
     801  aagaccaacc accagtagtt ctatccaact agcacctcca cctaacctac
     851  atagaaaacc tgaaagtatg cagaacctag aaaagcaaat acaagaacta
     901  agaagaacag ttaccaacct caatgaaaaa atatga