Sequence of DPV Blueberry red ringspot virus

Blueberry red ringspot virus isolate BRRSV20 cell-to-cell movement protein gene, complete cds.

ACC No: JF920971

Dated: 2011-12-07 | Length: 936 | CRC: -1094482508

                
ID   JF920971; SV 1; linear; genomic DNA; STD; VRL; 936 BP.
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AC   JF920971;
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DT   18-OCT-2011 (Rel. 110, Created)
DT   07-DEC-2011 (Rel. 111, Last updated, Version 2)
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DE   Blueberry red ringspot virus isolate BRRSV20 cell-to-cell movement protein
DE   gene, complete cds.
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KW   .
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OS   Blueberry red ringspot virus
OC   Viruses; Retro-transcribing viruses; Caulimoviridae; Soymovirus.
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RN   [1]
RP   1-936
RA   Kalinowska E., Paduch-Cichal E., Chodorska M.;
RT   "Genetic diversity in the movement protein coding region among Blueberry
RT   red ringspot virus (BRRSV) isolates";
RL   Unpublished.
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RN   [2]
RP   1-936
RA   Kalinowska E., Paduch-Cichal E., Chodorska M.;
RT   ;
RL   Submitted (07-MAY-2011) to the INSDC.
RL   Department of Plant Pathology, Warsaw University of Life Sciences
RL   WULS-SGGW, Nowoursynowska 166, Warsaw 02-787, Poland
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FH   Key             Location/Qualifiers
FH
FT   source          1. .936
FT                   /organism="Blueberry red ringspot virus"
FT                   /host="Vaccinium corymbosum cv. Darrow (highbush
FT                   blueberry)"
FT                   /isolate="BRRSV20"
FT                   /mol_type="genomic DNA"
FT                   /country="Poland"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:172220"
FT   CDS             1. .936
FT                   /codon_start=1
FT                   /product="cell-to-cell movement protein"
FT                   /db_xref="UniProtKB/TrEMBL:G4XZF2"
FT                   /protein_id="AEQ38576.1"
FT                   /translation="MKQMIIMGVDVQLERSKLKQIAKEGKLTLKSGQGIKSEGFLPSIT
FT                   RKNILYLGKFTSEQPLEISTAVGQEALSLVNGKQIADRIAKMKQSDKEKIQYIHLSTIQ
FT                   ILVKSTYASIDTPMDIIVIDNRITSKNKKEQVLGIIKGNLKYGVIKFDVSLHFAIPLVT
FT                   KNLSQSIGILYKFHRQDLMEKGDYPLSITYSVGYALSNSHHSVDYIDQEIIHIDDLFKN
FT                   TSTKLVTFEKKNENANDIFRAPPVRMIKPREDISKPTITDVTDPLKPTTSSSIQLAPPP
FT                   NLHRKPESMQNLEKQIQELRRTVTNLNEKI"
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SQ   Sequence 936 BP; 407 A; 149 C; 148 G; 232 T; 0 other;

jf920971 Length: 936  07-DEC-2011  Type: N  Check: 925  ..

       1  atgaaacaaa tgattattat gggagttgat gtccaattag aaagatctaa
      51  actaaaacaa atagcaaaag aaggaaaatt aacattaaaa tctggacaag
     101  gaataaaatc agaaggattt ttaccatcta tcactagaaa gaatatatta
     151  tatttaggaa agttcaccag cgagcaacca ttagaaatta gtacagcagt
     201  aggacaagaa gccttatcat tagttaatgg aaagcaaata gcagaccgaa
     251  tagcaaagat gaaacaatca gataaagaaa agattcagta tatacacttg
     301  agtacgatac agatattagt taaatctacc tatgcctcaa tagatacacc
     351  catggatatt atagttattg ataatagaat aacttctaag aataagaaag
     401  aacaagttct aggaataatt aaaggaaatc tgaaatatgg agttattaag
     451  tttgacgtaa gtttacactt cgccatacca ttagtcacca agaatttaag
     501  tcaatctata ggaatattat ataaatttca tagacaagat ctgatggaaa
     551  aaggagatta tccacttagt atcacctact ctgtaggata tgcattaagc
     601  aatagtcacc atagtgttga ttatatagat caagagatta tacatataga
     651  tgacctattt aagaatacca gtactaagct agtaacattc gaaaagaaaa
     701  atgaaaacgc taacgatata tttagagcac caccagttag aatgattaag
     751  cctagagagg atatatcaaa accaacaata acagatgtca ctgacccatt
     801  aaaaccaact accagtagtt ctatccaact agcaccgcca cctaacctac
     851  atagaaaacc agaaagtatg cagaacctag aaaagcaaat acaagaacta
     901  agaaggaccg ttaccaacct caatgaaaaa atatga