Sequence of DPV Banana bunchy top virus

Banana bunchy top virus isolate TO124 segment U3, complete sequence.

ACC No: JF957639

Dated: 2012-04-18 | Length: 1061 | CRC: -1436009197

                
ID   JF957639; SV 1; circular; genomic DNA; STD; VRL; 1061 BP.
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AC   JF957639;
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DT   25-DEC-2011 (Rel. 111, Created)
DT   18-APR-2012 (Rel. 112, Last updated, Version 2)
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DE   Banana bunchy top virus isolate TO124 segment U3, complete sequence.
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KW   .
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OS   Banana bunchy top virus
OC   Viruses; ssDNA viruses; Nanoviridae; Babuvirus.
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RN   [1]
RP   1-1061
RX   PUBMED; 22278830.
RA   Stainton D., Kraberger S., Walters M., Wiltshire E.J., Rosario K.,
RA   Halafihi M., Lolohea S., Katoa I., Faitua T.H., Aholelei W., Taufa L.,
RA   Thomas J.E., Collings D.A., Martin D.P., Varsani A.;
RT   "Evidence of inter-component recombination, intra-component recombination
RT   and reassortment in banana bunchy top virus";
RL   J. Gen. Virol. 93(5):1103-1119(2012).
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RN   [2]
RP   1-1061
RA   Varsani A., Stainton D., Kraberger S., Walters M., Wiltshire E.,
RA   Marinov M., Rosario K., Lolohea S., Halafihi M., Katoa I., Faitua T.H.,
RA   Aholelei W., Taufa L., Thomas J.E., Collings D., Martin D.P.;
RT   ;
RL   Submitted (12-MAY-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1061
FT                   /organism="Banana bunchy top virus"
FT                   /segment="U3"
FT                   /host="banana"
FT                   /isolate="TO124"
FT                   /mol_type="genomic DNA"
FT                   /country="Tonga"
FT                   /lat_lon="21.2 S 175.2 W"
FT                   /collection_date="Apr-2010"
FT                   /db_xref="taxon:12585"
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SQ   Sequence 1061 BP; 350 A; 182 C; 240 G; 289 T; 0 other;

jf957639 Length: 1061  18-APR-2012  Type: N  Check: 6967  ..

       1  tattaccccc agcgccggga cgggacatgg gctttttaaa tgggctttgc
      51  gagtttgaac agttcagtat cttcgttatt gggccaaccc ggcccaataa
     101  ttaagagaac gtgttcaaat tcgtggtatg accgaaggtc aaggtaaccg
     151  gtcaacatta ttctggcttg cgcagcaagc aacacgaatt aaaattttaa
     201  ttcgtaggac acgtggacgg accgaaatac tcctgcatct ctataaatac
     251  cctaaacctg tgaaggataa ttgctctctc tcttctgtca aggtggtggt
     301  gctaaggcgg aagatcgcca gcggcgatcg tcggaacgac ctgcatctag
     351  agaggcggcg aggaaactac gaagcgtata tcgggtattt atagacttat
     401  agcgtagcta gaagtataca ctgtacagat attgtatttt gtaaattacg
     451  aagaaattcg tatttgatat taataaaaca actgggtttg ttaatgttta
     501  cattaactag tatcttttat gtacaaatta aaatacagta tacggaacgt
     551  atactaatca aaatattaaa tgacaggcga agcatgatta acaggtgttt
     601  aggtataatt aaaataatta tgtcaagtaa ttataatacg gaaaatgaat
     651  aagtatgagg tgaaagagga gatattagaa tatttaaaaa cccaattata
     701  ttattttgga acgaaataca acacgctatg aaatacaaga cactatgaca
     751  aatgtacggg tatctgattg gttatcttaa cgtataaggg ccgcaggccc
     801  gtcaagatgg aatgaacggt ccagattaat tccttaacga cgaaggaagg
     851  aatctatgag gggaccacac aatatacagc tgtcaatgat ttattaaaca
     901  atataataac caaaagacct tcgtacccct gctaatgatg acgtataggg
     951  gtgtcccgag gtaatttaac atatgtctga gaagagatat gggccgttgg
    1001  atgcctccat cggacgatgg aggttgaatg aacttctgct gacgtaggcg
    1051  ctggggctta t