Sequence of DPV Banana bunchy top virus

Banana bunchy top virus isolate TO306 segment U3, complete sequence.

ACC No: JF957644

Dated: 2012-04-18 | Length: 1062 | CRC: 820339508

                
ID   JF957644; SV 1; circular; genomic DNA; STD; VRL; 1062 BP.
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AC   JF957644;
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DT   25-DEC-2011 (Rel. 111, Created)
DT   18-APR-2012 (Rel. 112, Last updated, Version 2)
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DE   Banana bunchy top virus isolate TO306 segment U3, complete sequence.
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KW   .
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OS   Banana bunchy top virus
OC   Viruses; ssDNA viruses; Nanoviridae; Babuvirus.
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RN   [1]
RP   1-1062
RX   PUBMED; 22278830.
RA   Stainton D., Kraberger S., Walters M., Wiltshire E.J., Rosario K.,
RA   Halafihi M., Lolohea S., Katoa I., Faitua T.H., Aholelei W., Taufa L.,
RA   Thomas J.E., Collings D.A., Martin D.P., Varsani A.;
RT   "Evidence of inter-component recombination, intra-component recombination
RT   and reassortment in banana bunchy top virus";
RL   J. Gen. Virol. 93(5):1103-1119(2012).
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RN   [2]
RP   1-1062
RA   Varsani A., Stainton D., Kraberger S., Walters M., Wiltshire E.,
RA   Marinov M., Rosario K., Lolohea S., Halafihi M., Katoa I., Faitua T.H.,
RA   Aholelei W., Taufa L., Thomas J.E., Collings D., Martin D.P.;
RT   ;
RL   Submitted (12-MAY-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1062
FT                   /organism="Banana bunchy top virus"
FT                   /segment="U3"
FT                   /host="banana"
FT                   /isolate="TO306"
FT                   /mol_type="genomic DNA"
FT                   /country="Tonga"
FT                   /lat_lon="19.8 S 174.35 W"
FT                   /collection_date="Apr-2010"
FT                   /db_xref="taxon:12585"
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SQ   Sequence 1062 BP; 355 A; 180 C; 237 G; 290 T; 0 other;

jf957644 Length: 1062  18-APR-2012  Type: N  Check: 7508  ..

       1  tattaccccc agcgctcagg acgggacatg ggctttttaa atgggctttg
      51  cgagtttgaa cagttcagta tcttcgttat tgggccaacc cggcccaata
     101  attaagagaa cgtgttcaaa ttcgtggtat gaccgaaggt caaggtaacc
     151  ggtcaacatt attctggctt gcgcagcaag atacacgaat taatttatta
     201  attcgtagga cacgtggacg gaccgaaata ctcctgcatc tctataaata
     251  cccaaaacct gtcaaggata attgctctct ctcttctgtc aaggtggttg
     301  tgctaaggcg gaagatcgcc agcggcgatc gtcggaacga cctgcatcta
     351  gagaggcggc gaggaaacta cgaagcgtat atcgggtatt tatagactta
     401  tagcgtagct agaagtagac actgtataga tattgtattt tgtaaattac
     451  gaagaaattc gtatttgata ttaataaaac aactgggttt gttaatgttt
     501  acattaacta gtatctttta tgtacaaatt aaaatacagt atacggaacg
     551  tatactaatg aaaaaaataa atgacaggcg aagcatgatt tacaggtgtt
     601  taggtataat taagataatt atgtcaagca attataatac ggaaaatgaa
     651  taagtatgag gtgaaagagg agatattaga atatttaaaa acccaattat
     701  attattttgg aacgaaatac aacacgctat gaaatacaag acgctatgac
     751  aaatgtacgg gtatctgatt gtgtatctta acgtataagg gccgcaggcc
     801  cgtcaagatg gaatgaacgg tccagatcaa ttccttaacg acgaaggaag
     851  gaatctatca ggggaccaca caatatacag ctgtcaatga tttaataaat
     901  aatataataa ccaaaagacc tttgtacccc tgataatgat gacgtatagg
     951  ggtgtcccga ggtaatttaa catagctctg aaaagagata tgagtcgttg
    1001  gatgcctcca tcggacgatg gaggttgaat gaacttctgc tgacgtaagc
    1051  gctggggctt at