Sequence of DPV Banana bunchy top virus

Banana bunchy top virus isolate TO310 segment C, complete sequence.

ACC No: JF957681

Dated: 2012-04-18 | Length: 1018 | CRC: 134921291

                
ID   JF957681; SV 1; circular; genomic DNA; STD; VRL; 1018 BP.
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AC   JF957681;
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DT   25-DEC-2011 (Rel. 111, Created)
DT   18-APR-2012 (Rel. 112, Last updated, Version 2)
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DE   Banana bunchy top virus isolate TO310 segment C, complete sequence.
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KW   .
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OS   Banana bunchy top virus
OC   Viruses; ssDNA viruses; Nanoviridae; Babuvirus.
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RN   [1]
RP   1-1018
RX   PUBMED; 22278830.
RA   Stainton D., Kraberger S., Walters M., Wiltshire E.J., Rosario K.,
RA   Halafihi M., Lolohea S., Katoa I., Faitua T.H., Aholelei W., Taufa L.,
RA   Thomas J.E., Collings D.A., Martin D.P., Varsani A.;
RT   "Evidence of inter-component recombination, intra-component recombination
RT   and reassortment in banana bunchy top virus";
RL   J. Gen. Virol. 93(5):1103-1119(2012).
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RN   [2]
RP   1-1018
RA   Varsani A., Stainton D., Kraberger S., Walters M., Wiltshire E.,
RA   Marinov M., Rosario K., Lolohea S., Halafihi M., Katoa I., Faitua T.H.,
RA   Aholelei W., Taufa L., Thomas J.E., Collings D., Martin D.P.;
RT   ;
RL   Submitted (12-MAY-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1018
FT                   /organism="Banana bunchy top virus"
FT                   /segment="C"
FT                   /host="banana"
FT                   /isolate="TO310"
FT                   /mol_type="genomic DNA"
FT                   /country="Tonga"
FT                   /lat_lon="19.78 S 174.34 W"
FT                   /collection_date="Apr-2010"
FT                   /db_xref="taxon:12585"
FT   CDS             492. .710
FT                   /codon_start=1
FT                   /product="cell cycle link protein"
FT                   /db_xref="UniProtKB/TrEMBL:G9E2Q4"
FT                   /protein_id="AEL32415.1"
FT                   /translation="MVFFYHEYLEELGGDYSVYQDLYCDEVLSSSSTEEEDVGVIYRNV
FT                   IMASTQEKFSWSDCQKIVISDYDVTLL"
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SQ   Sequence 1018 BP; 338 A; 163 C; 235 G; 282 T; 0 other;

jf957681 Length: 1018  18-APR-2012  Type: N  Check: 8014  ..

       1  tattaccccc agcgctcggg acgggacatc acgtgcatct aacagacgca
      51  cgtgagaata cagtagcttg cagcgaaaga tagacgtcca catcaataaa
     101  gaagaaggaa tattctttgc ttcggcacga agcaaagggt atagatattt
     151  gttcgagatg cgaaaatgga ggctatttaa acctgatggt tttgtgattt
     201  ccgaaatcac tcgtcgggag agaaatggag ttctgggaat cgtctgccat
     251  gcctgacgat gtcaagagag agattaagga aatatattgg gaagatcgga
     301  agaaacttct gttctgtcag aagttgaaga gctatgtcag aaggattctt
     351  gtttatggag atcaagagga tgcccttgct ggagtgaagg atatgaagac
     401  ttctattatt cgctatagcg aatacttgaa gaaaccatgt gtggtaattt
     451  gttgtgttag caataaatca attgtgtata ggttaaacag catggtgttc
     501  ttttatcatg aataccttga agaactaggt ggtgattact cagtatatca
     551  agatctctat tgtgatgagg tactctcttc ttcatcgaca gaggaagaag
     601  atgtaggagt aatatatagg aatgttatca tggcatcgac acaagagaag
     651  ttctcttgga gtgattgtca gaagatagtt atatcagact atgatgtaac
     701  attactctaa tgtaatatcc attatcatca ataaaataat ggaatgttga
     751  ttatgtattt atcataaata cataatggta tacgtatagc ataaaataca
     801  ttaaccaaca tacaacacac tataaaatac aacacactat aacaaatgta
     851  cgggtatctg attgggttat attaacccct taagggccga aggcccgttt
     901  aaatatgtgt tggacgaagt ccaagcacaa aaaagtaagc agaacaacgg
     951  aataatatga gctggcaacg tagggtccat gtcccgagtt agtgcgccac
    1001  gtgagcgctg gggcttat