Sequence of DPV Grapevine fleck virus

Grapevine fleck virus isolate BF coat protein gene, complete cds.

ACC No: JN022610

Dated: 2011-07-18 | Length: 693 | CRC: 312350056

                
ID   JN022610; SV 1; linear; genomic RNA; STD; VRL; 693 BP.
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AC   JN022610;
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DT   18-JUL-2011 (Rel. 109, Created)
DT   18-JUL-2011 (Rel. 109, Last updated, Version 1)
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DE   Grapevine fleck virus isolate BF coat protein gene, complete cds.
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KW   .
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OS   Grapevine fleck virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Tymoviridae; Maculavirus.
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RN   [1]
RP   1-693
RA   Fajardo T.V.M., Dubiela C.R., Eiras M., Souto E.R., Nickel O.;
RT   "Detection and molecular characterization of the Grapevine fleck virus coat
RT   protein gene";
RL   Unpublished.
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RN   [2]
RP   1-693
RA   Fajardo T.V.M., Dubiela C.R., Eiras M., Souto E.R., Nickel O.;
RT   ;
RL   Submitted (25-MAY-2011) to the INSDC.
RL   Laboratorio de Virologia, Embrapa Uva e Vinho - Embrapa - Brazil, Rua
RL   Livramento, 515, Bento Goncalves, RS 95700-000, Brazil
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FH   Key             Location/Qualifiers
FH
FT   source          1. .693
FT                   /organism="Grapevine fleck virus"
FT                   /host="grapevine cv. Benefuji grafted on cv. Rupestris du
FT                   Lot"
FT                   /isolate="BF"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="30-Apr-2003"
FT                   /db_xref="taxon:103722"
FT   CDS             1. .693
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT                   /protein_id="AEK12260.1"
FT                   /translation="MSLPADLLLGAISSLLRNPPTSDAAAPSADQPAVSSSRSDSRLVS
FT                   APLPAAPPAPTAIARNPRVSIHLPFQFLWYDITGTESSYTSLSVASRPEVVTVARPYRH
FT                   ARLTSLEAFVQPTASSATYPQTVDLCWTIDSVTPARSEILSVFGAQRIAWGSVHFSAPI
FT                   LLPAELSSLNPTIKDSVTYTDCPRLTCGFYRNDACVALGSSAPICGSILIRGVIECSAP
FT                   TNRPTPSS"
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SQ   Sequence 693 BP; 91 A; 342 C; 127 G; 133 T; 0 other;

jn022610 Length: 693  18-JUL-2011  Type: N  Check: 6895  ..

       1  atgagcctcc ccgccgacct cctcctgggc gccatttcct ctctcctccg
      51  caaccctccc acctctgatg ccgccgctcc gtctgctgac cagcctgctg
     101  tctctagctc tcgctcagac tctcgcctgg tcagcgctcc gctccctgct
     151  gcgccacccg ccccgaccgc cattgcccgc aaccctcgcg taagcatcca
     201  cctccccttc cagttcctgt ggtatgacat cacaggcacc gagtcctcct
     251  acacctccct gtccgtcgcc tcccgtcccg aagtcgtcac cgtcgcccgc
     301  ccctaccgcc acgcccgcct cacctccctc gaagccttcg tccaacccac
     351  ggcctcctca gccacctacc cccaaaccgt cgacctctgc tggaccatcg
     401  actccgtcac ccccgcccgc tctgagatcc tctccgtctt cggcgcccaa
     451  cgcatcgcgt ggggctccgt ccacttctcc gcccccatcc tcctccccgc
     501  cgagctctcc agcctcaacc ccaccatcaa ggactccgtc acctacaccg
     551  actgcccccg cctcacctgt ggcttctacc gcaatgacgc ctgcgtcgcc
     601  ctcggttcct ccgcccccat ctgcggctcc atcctcatcc gcggcgttat
     651  cgagtgctcc gcccccacca accgccccac cccctcgtca tga