Sequence of DPV Potato virus Y

Potato virus Y isolate Yz-CRM2 coat protein gene, partial cds.

ACC No: JN034568

Dated: 2011-12-07 | Length: 801 | CRC: -1235599519

                
ID   JN034568; SV 1; linear; genomic RNA; STD; VRL; 801 BP.
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AC   JN034568;
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DT   11-OCT-2011 (Rel. 110, Created)
DT   07-DEC-2011 (Rel. 111, Last updated, Version 2)
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DE   Potato virus Y isolate Yz-CRM2 coat protein gene, partial cds.
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KW   .
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-801
RX   PUBMED; 21922324.
RA   Kehoe M.A., Jones R.A.;
RT   "A proposal to help resolve the disagreement between naming of potato virus
RT   Y strain groups defined by resistance phenotypes and those defined by
RT   sequencing";
RL   Arch. Virol. 156(12):2273-2278(2011).
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RN   [2]
RP   1-801
RA   Kehoe M.A., Jones R.A.C.;
RT   ;
RL   Submitted (27-MAY-2011) to the INSDC.
RL   Plant Virology, Department of Agriculture and Food WA, 3 Baron-Hay Court,
RL   South Perth, WA 6151, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .801
FT                   /organism="Potato virus Y"
FT                   /host="Solanum tuberosum cv. Pentland"
FT                   /isolate="Yz-CRM2"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Cambridge"
FT                   /collection_date="1982"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .>801
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="UniProtKB/TrEMBL:G5CCT9"
FT                   /protein_id="AEQ16243.1"
FT                   /translation="ANDTIDAGGSSKKDARPEQGSIQSNLNKGKDKDVNAGTSGTHTVP
FT                   RIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRMAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGNEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLIRNLRDVGLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
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SQ   Sequence 801 BP; 267 A; 163 C; 202 G; 169 T; 0 other;

jn034568 Length: 801  07-DEC-2011  Type: N  Check: 3377  ..

       1  gcaaatgaca caatcgatgc aggaggaagc agcaagaaag atgcaagacc
      51  agagcaaggc agcatccagt caaacctgaa caaaggaaaa gataaggatg
     101  tgaatgctgg tacatctggt acacatactg tgccgagaat caaggctatc
     151  acgtccaaaa tgagaatgcc caaaagcaag ggagcaaccg tgctaaactt
     201  agaacacttg cttgagtatg ctccacaaca aattgatatt tcaaatactc
     251  gggcaactca atcacagttt gatacgtggt atgaggcagt gcggatggca
     301  tacgacatag gagaaactga gatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa tgtcaacgga gtttgggtta
     401  tgatggatgg gaatgaacaa gtcgagtacc cgttgaaacc aatcgttgag
     451  aatgcaaaac caacccttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttaat tcgaaatctg cgggatgtgg gtttagcgcg ttatgccttt
     601  gacttttatg aggtcacatc acgaacacca gtgagggcta gggaagcgca
     651  cattcaaatg aaggccgcag cattgaaatc agcccaacct cgacttttcg
     701  ggttggacgg tggcatcagt acacaagagg agaacacaga gaggcacacc
     751  accgaggatg tctctccaag tatgcatact ctacttggag tcaagaacat
     801  g