Sequence of DPV Malvastrum yellow vein Yunnan virus
Malvastrum yellow vein Yunnan virus isolate SC101 clone 10134, complete genome.
ACC No: JN082238
Dated: 2011-08-17 | Length: 2747 | CRC: -372657113
ID JN082238; SV 1; circular; genomic DNA; STD; VRL; 2747 BP.
XX
AC JN082238;
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DT 17-AUG-2011 (Rel. 109, Created)
DT 17-AUG-2011 (Rel. 109, Last updated, Version 1)
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DE Malvastrum yellow vein Yunnan virus isolate SC101 clone 10134, complete
DE genome.
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KW .
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OS Malvastrum yellow vein Yunnan virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2747
RA Tao R., Yun B.L., Qi Y., Ling Q.;
RT ;
RL Submitted (03-JUN-2011) to the INSDC.
RL Plant Pathology, College of Plant Protection, 86-023-68250517, Tiansheng
RL Road 2, Chongqing, China, Chongqing, Chongqing 400716, China
XX
FH Key Location/Qualifiers
FH
FT source 1. .2747
FT /organism="Malvastrum yellow vein Yunnan virus"
FT /host="Malvastrum coromandelianum"
FT /isolate="SC101"
FT /mol_type="genomic DNA"
FT /country="China:Sichuan"
FT /collection_date="05-Sep-2010"
FT /identified_by="Qing Ling"
FT /clone="10134"
FT /db_xref="taxon:290030"
FT gene 131. .469
FT /gene="AV2"
FT CDS 131. .469
FT /codon_start=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="AEM36753.1"
FT /translation="MWDPLLNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGFDLIREL
FT ISILRSRNYVEASCRYRHFYSRVEGASSSELRQPLLNPCSCPHCPRHKISKLGEQAHES
FT QAQNVQDV"
FT gene 291. .1061
FT /gene="AV1"
FT CDS 291. .1061
FT /codon_start=1
FT /gene="AV1"
FT /product="AV1 protein"
FT /protein_id="AEM36752.1"
FT /translation="MSKRPADIVISTPGSKVRRRLNFDSPYSTRAAVPTVRVTKSRSWA
FT NRPMNRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR
FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEP
FT STATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH
FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN"
FT gene complement(1058. .1462)
FT /gene="AC3"
FT CDS complement(1058. .1462)
FT /codon_start=1
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="AEM36757.1"
FT /translation="MDLRTGEPITAAQAWSGAYIWEVPNPLYFKILNHVNRPFTMNMDI
FT ITIGIQFNYNLRRALGVHKCFLTYRIWTTLHPQIGLFLRVFKTQVLKYLNNLGVISINS
FT IIRAVNHVLWKKIEQTMYVDMDSEIKFNIY"
FT gene complement(1155. .1607)
FT /gene="AC2"
FT CDS complement(1155. .1607)
FT /codon_start=1
FT /gene="AC2"
FT /product="AC2 protein"
FT /protein_id="AEM36756.1"
FT /translation="MRSSSPSKDHCTQVPIKLQHRDAKRRNRRKRVDLECGCSYYLSIN
FT CFNHGFTHRGTHHCSSSMEWRLYLGSSKSPLFQDPQPRQPSIHDEHGHHNNRDPIQLQP
FT SESSGSAQVFSDIPNLDDLTPSDWSFLKGIQNPSPQVSKQSRCNFN"
FT gene complement(1504. .2595)
FT /gene="AC1"
FT CDS complement(1504. .2595)
FT /codon_start=1
FT /gene="AC1"
FT /product="AC1 protein"
FT /protein_id="AEM36754.1"
FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSIKFIR
FT ICRELHKNGNPHLHVLIQFEGKFQCRNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYV
FT EKDGDILDHGIFQVDGRSARGGCQTANDAYTEAINAGSKAQALNILKEKAPRDFLLQFH
FT NLNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNIIDDVDPHFLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNTALKNWAIKNAIFVTLEGPL
FT YSGSNQTTAQGREETQQEEESRS"
FT gene complement(2145. .2438)
FT /gene="AC4"
FT CDS complement(2145. .2438)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="AEM36755.1"
FT /translation="MGILTCMFSSSSKGSSSVETIDSSTSHPQAGQHISIQTFRELKAQ
FT AMSKPTWRKTETSLIMEFSKSMEDQLEEVARLPTTHIPRQSTQGPKLRPSIY"
XX
SQ Sequence 2747 BP; 706 A; 557 C; 639 G; 845 T; 0 other;
jn082238 Length: 2747 17-AUG-2011 Type: N Check: 5717 ..
1 accggatggc cgcgcaattt tttatgggcc cccccactaa ctactgtctg
51 ccaatcacat gacgcgctca aagcttaaat aattctcccg cctattataa
101 gtacttcgtg cctaagtttc gctttgaaaa atgtgggatc cattattaaa
151 cgagttcccc gagacggttc acgggtttcg gtgcatgctt tcaatcaaat
201 atcttcagtt actctctgaa ggatactctc cagatacggt tggtttcgat
251 ctaatacgtg agttaatttc tattttgcgt tccaggaatt atgtcgaagc
301 gtcctgcaga tatcgtcatt tctactcccg ggtcgaaggt gcgtcgtcgt
351 ctgaacttcg acagccctta ctcaacccgt gcagctgtcc ccactgtccg
401 cgtcacaaaa tctcgaagtt gggcgaacag gcccatgaat cgcaagccca
451 gaatgtacag gatgtataga agccctgatg tccctaaggg atgtgaaggc
501 ccatgtaagg tccaatcttt cgatgcgaag aacgatattg ggcatatggg
551 taaggtgatc tgtttgtctg acgttacccg tggtattgga cttacccatc
601 gagttggcaa acgtttctgt gtcaagtcac tttatttcgt tggcaagata
651 tggatggatg aaaatattaa ggttaagaat cacacgaaca ccgttttgtt
701 ctggatagtt agggatcgac gtcctactgg aacgccttat gattttcagc
751 aggtttttaa tgtttatgat aatgagcctt ccacggcaac tgtgaaaaac
801 gaccagcgtg atcgtttcca ggttatcagg aggttccagg caacggtgac
851 cggtggacaa tatgcagcga aggagcaggc gattattaga aagttttatc
901 gtgttaataa ttatgtagtg tataatcacc aggaagctgg gaagtatgag
951 aaccatactg aaaatgcttt gttattgtat atggcatgta cccatgcctc
1001 taatcccgtg tatgctactt tgaaagtcag gagttatttc tatgactcag
1051 tgacgaatta ataaatatta aattttattt ctgaatccat gtctacatac
1101 atagtttgtt ctattttttt ccataataca tgattcacag ctctaataat
1151 tgagttaatt gaaattacac ctagattgtt tagatacttg aggacttggg
1201 ttttgaatac ccttaagaaa agaccaatct gagggtgtaa ggtcgtccag
1251 attcggtatg tcagaaaaca cttgtgcact cccagagctc tccgaaggtt
1301 gtagttgaat tggatcccta ttgttatgat gtccatgttc atcgtgaatg
1351 gacggttgac gtggttgagg atcttgaaat aaaggggatt tggaacttcc
1401 cagatatagg cgccactcca tgcttgagct gcagtgatgg gttcccctgt
1451 gcgtaaatcc atggttaaag cagttgattg acaaataata agaacacccg
1501 cattcaagat cgactctctt cctcctgttg cgtctcttcg cgtccctgtg
1551 ctgtagtttg attggaacct gagtacagtg gtccttcgag ggtgacgaag
1601 atcgcattct tgatagccca gtttttgagt gcggtgttct tgtcctcgtc
1651 gaggaattct ttataactgc tgttgggacc aggattgcat aggaagattg
1701 tcggtattcc gcctttaatt tgaactggct tcccgtactt tgtgttggat
1751 tgccagtccc tttgggcccc catgaactct ttaaagtgct tgaggaagtg
1801 cgggtcgacg tcatcaatga tgttatacca agcatcattg ctgtacactt
1851 tgggacttaa gtctagatgg ccacacaaat agttgtgtgg gcctagcgac
1901 ctagcccaca tcgtcttccc ggtccgacta tctccctcga tgactatact
1951 ttgaggtcta aggggccgcg cagcggcatc gacaacattc tcgcacgccc
2001 actcttcaag ttcttctgga acttgatcaa atgaagaaga agaaaaagga
2051 gaaacataag gagctggtgg ctcttgaaaa tacctatcta aatttgaatt
2101 taaattatga aattgaagta gaaagtctct tggggctttc tccttcaata
2151 tattgagggc ctgagctttg gaccctgcgt tgattgcctc ggtatatgcg
2201 tcgttggcag tctggcaacc tcctctagct gatcttccat cgacttggaa
2251 aattccatga tcaaggatgt ctccgtcttt ctccacgtag gttttgacat
2301 cgcttgagct tttagctccc tgaatgtttg gatggaaatg tgctgacctg
2351 cttggggatg tgaggtcgaa gaatctattg tttctacact ggaacttccc
2401 ttcgaactgg atgagaacat gcaggtgagg attcccattt ttatgaagct
2451 ctctgcagat tctaatgaat tttatggaag ttggggtttg gagatttaat
2501 aattgggaaa gtgcctcttc ttttgtgagg gagcacttgg gataagtgag
2551 gaaataattt ttggcattta ttttaaaccg attgggggct gccatgttga
2601 ctaagtcaat cggtgtctct caatttgctc tatgtatcgg tgtattggag
2651 tcctatatat atggagaccc taatggcata attgtaataa aagaaaaata
2701 atttgatatt aaaacgaaaa ggctaaagcg gccatccgtc taatatt