Sequence of DPV Malvastrum yellow vein virus
Malvastrum yellow vein virus isolate SC101 clone 101211, complete genome.
ACC No: JN082239
Dated: 2011-08-17 | Length: 2739 | CRC: 839184411
ID JN082239; SV 1; circular; genomic DNA; STD; VRL; 2739 BP.
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AC JN082239;
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DT 17-AUG-2011 (Rel. 109, Created)
DT 17-AUG-2011 (Rel. 109, Last updated, Version 1)
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DE Malvastrum yellow vein virus isolate SC101 clone 101211, complete genome.
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KW .
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OS Malvastrum yellow vein virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2739
RA Tao R., Yun B.L., Qi Y., Ling Q.;
RT ;
RL Submitted (03-JUN-2011) to the INSDC.
RL Plant Pathology, College of Plant Protection, 86-023-68250517, Tiansheng
RL Road 2, Chongqing, China, Chongqing, Chongqing 400716, China
XX
FH Key Location/Qualifiers
FH
FT source 1. .2739
FT /organism="Malvastrum yellow vein virus"
FT /host="Malvastrum coromandelianum"
FT /isolate="SC101"
FT /mol_type="genomic DNA"
FT /country="China:Sichuan"
FT /collected_by="Qing Ling"
FT /collection_date="04-Aug-2010"
FT /clone="101211"
FT /db_xref="taxon:222475"
FT gene 118. .465
FT /gene="AV2"
FT CDS 118. .465
FT /codon_start=1
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="AEM36759.1"
FT /translation="MWDPLLNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGYYLIREL
FT ISILRSRNYVEASCRYRHFYSRVEGASSSELRQPLLNPCSCPHCPRHKISKLGEQAHES
FT QAQNVQDVQKP"
FT gene 278. .1048
FT /gene="AV1"
FT CDS 278. .1048
FT /codon_start=1
FT /gene="AV1"
FT /product="AV1 protein"
FT /protein_id="AEM36758.1"
FT /translation="MSKRPADIVISTPGSKVRRRLNFDSPYSTRAAVPTVRVTKSRSWA
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR
FT VGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPTGTPQDFGDVFNMFDNEP
FT STATVKNMHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(1051. .1455)
FT /gene="AC3"
FT CDS complement(1051. .1455)
FT /codon_start=1
FT /gene="AC3"
FT /product="AC3 protein"
FT /protein_id="AEM36763.1"
FT /translation="MDLRTGEPITAAQAWSGAYIWELPNPLYFKILSHDNRPFTMNMDI
FT ITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPRTGLFLRVFKTQVLKYLRNLGVISINA
FT IIRAVNHVLWKKIEQTMYVDMTSEIKFNLY"
FT gene complement(1148. .1600)
FT /gene="AC2"
FT CDS complement(1148. .1600)
FT /codon_start=1
FT /gene="AC2"
FT /product="AC2 protein"
FT /protein_id="AEM36762.1"
FT /translation="MRYSSPSKDHCTQVPIKVQHREAKKRNRRRRVDLECGCSYFLSIN
FT CFNHGFTHRGTHHCSSSMEWRLYLGASKSPLFQDPQPRQPAIHDEHGHHNNQDPIQLQP
FT SESSGSAQVFSDLPNLDDLTPSDWSFLKGIQNPSPQVSQKSRCNLN"
FT gene complement(1497. .2588)
FT /gene="AC1"
FT CDS complement(1497. .2588)
FT /codon_start=1
FT /gene="AC1"
FT /product="AC1 protein"
FT /protein_id="AEM36760.1"
FT /translation="MPQPKKFLINAKNYFLTYPKCSLTKEEALSQFLNLQTPTSIKFIR
FT ICRELHENGTPHLHVLIQFAGKFKCQNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYI
FT KKDGDILDHGIFQVDGRSARGGCQSANDAYAEAINSGSKAAALNILKEKAPKDFVLQFH
FT NLNNNLDRIFTPPLEEYISPFLSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWALKNAIFVTLQGPL
FT YSSSNQSTAQGSEETQQEEESRS"
FT gene complement(2138. .2431)
FT /gene="AC4"
FT CDS complement(2138. .2431)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="AEM36761.1"
FT /translation="MGLLTCMFSSSSQENSNAKTTDSSTSHPQAGQHISIQTYRELKAQ
FT AMSKPTLRKTETSLIMEFSKSMDDQLEEVANLPTTHMPRQSIQGPKQRPSIY"
XX
SQ Sequence 2739 BP; 691 A; 558 C; 655 G; 835 T; 0 other;
jn082239 Length: 2739 17-AUG-2011 Type: N Check: 6184 ..
1 accggatggc cgcgcgattt tttctggtgg tccctcgtcc aatcagatga
51 cgcgctcaaa gcttaaataa ctctcccgcc gttataaata cttcgggcct
101 aagtatttgt ttgaaaaatg tgggatccac tcttaaacga gttccccgag
151 acggttcacg ggtttcggtg tatgctatcg atcaaatatc ttcaactact
201 ctctgaagga tactctcccg atacggttgg ctactatcta atacgtgagt
251 taatttctat tttacgttct aggaactatg tcgaagcgtc ctgcagatat
301 cgtcatttct actcccgggt cgaaggtgcg tcgtcgtctg aacttcgaca
351 gcccttactc aacccgtgca gctgtcccca ctgtccgcgt cacaaaatct
401 cgaagttggg cgaacaggcc catgaatcgc aagcccagaa tgtacaggat
451 gtacagaagc cctgatgttc caaggggttg tgagggtccg tgtaaggtac
501 agtcttttga gtccagacac gatgtagtcc atataggtaa ggtcatgtgt
551 attagtgatg tcacacgagg tactgggctg acccatagag ttgggaaacg
601 tttttgtgtt aagtcagtct acgttttggg taagatatgg atggatgaaa
651 atatcaagag taagaatcac acgaacaatg tgatgttctt tcttgtccga
701 gatcgacgtc ctaccggcac gcctcaggat tttggagatg tctttaacat
751 gtttgacaac gagcctagca ccgctactgt gaagaatatg catcgagatc
801 gttaccaggt gttacggaag tggtatgcaa ctgtcactgg tggacagtat
851 ggagcaaagg aacaggcttt ggttaagaag tttgttaggg ttaataatta
901 tgtggtttac aaccagcaag aggctgggaa gtacgagaat cattccgaga
951 atgccttgat gttgtatatg gcatgtaccc atgcctctaa tcctgtgtac
1001 gctaccctta agattaggat ctacttctac gattctgtaa ccaactgata
1051 ttaataaaga ttgaatttta tttctgaagt catgtctaca tacatagttt
1101 gctctatctt tttccataat acatgattta cagctctaat aattgcgtta
1151 attgagatta caccgagatt tctgagatac ttgaggactt gggttttgaa
1201 tacccttaag aaaagaccag tccgagggtg taaggtcgtc cagattcggt
1251 aggtcagaaa acacttgtgc actcccagag ctctccgaag gttgtagttg
1301 aattggatcc tgattgttat gatgtccatg ttcatcgtga atggccggtt
1351 gtcgtggctg aggatcttga aatagagggg atttggaagc tcccagatat
1401 aggcgccact ccatgcttga gctgcagtga tgggttcccc tgtgcgtaaa
1451 tccatggttg aagcagttta ttgatagaaa ataagaacac ccgcattcaa
1501 gatcgactct cctcctcctg ttgcgtttct tcgcttccct gtgctgtact
1551 ttgattggaa cttgagtaca gtggtccttg gagggtgacg aatatcgcat
1601 tcttgagagc ccaattcttt agtgctgtgt tcttttcctc gtcgaggaat
1651 tctttatagc tgctattggg accaggattg cataggaaga ttgtcggtat
1701 cccgccttta atttgaactg gcttcccgta ttttgtgttg gattgccagt
1751 ccctttgggc ccccatgaac tccttaaagt gcttgaggaa atgcgggtcg
1801 acgtcatcaa tgacgttgta ccatgcgtcg ttgctgtaga tctttggact
1851 cagatctaga tgcccacaca gatagttatg tgggcctagt gacctggccc
1901 acattgtctt cccggttcga ctatctccct cgatgactat actttgaggt
1951 ctaaggggcc gcgcagcggc atcgacgaca ttctcgcacg cccactcttc
2001 aagttcttct ggaacttgat cgaaagaaga agataaaaaa ggagaaatat
2051 attcctctag tggaggagta aaaatcctat ctaaattatt atttaaatta
2101 tgaaactgta aaacaaaatc tttaggagcc ttctccttta atatattgag
2151 ggccgctgct ttggaccctg aattgattgc ctcggcatat gcgtcgttgg
2201 cagattggca acctcctcta gctgatcgtc catcgacttg gaaaattcca
2251 tgatcaagga tgtctccgtc tttcttaatg taggttttga catcgcttga
2301 gcttttagct ccctgtatgt ttggatggaa atgtgctgac ctgcttgggg
2351 atgtgaggtc gaagaatctg ttgttttggc atttgaattt tcctgcgaac
2401 tggatgagaa catgcaagtg aggagtccca ttttcatgaa gctctctgca
2451 gattctaatg aattttatgg aagtgggggt ttggagattt aagaattggg
2501 aaagtgcctc ttctttagtg agggagcact tgggataagt gaggaaataa
2551 tttttggcat ttataagaaa tttctttggt tgaggcatgt tgacttggtc
2601 aatcgggtcc tctcaaactt ggctatgcaa tcggggaatg ggtccttatt
2651 tatagttcag gacctaaatg gcattattcg taattttgca aagaaattca
2701 aaatctacac gctccaaaag cggccatccg tataatatt