Sequence of DPV African cassava mosaic virus
African cassava mosaic virus-Ghana isolate ACMV segment DNA-B, complete sequence.
ACC No: JN165086
Dated: 2011-08-25 | Length: 2725 | CRC: 261974006
ID JN165086; SV 1; circular; genomic DNA; STD; VRL; 2725 BP.
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AC JN165086;
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DT 08-AUG-2011 (Rel. 109, Created)
DT 25-AUG-2011 (Rel. 109, Last updated, Version 2)
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DE African cassava mosaic virus-Ghana isolate ACMV segment DNA-B, complete
DE sequence.
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KW .
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OS African cassava mosaic virus-Ghana
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2725
RA Oteng-Frimpong R., Torkpo S.K., Gafni Y., Levy Y., Kwame-Offei S.;
RT ;
RL Submitted (06-JUN-2011) to the INSDC.
RL Plant Sciences, ARO Volcani Center, Derech Hamacabim, Bet Dagan 50520,
RL Israel
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CC GenBank Accession Numbers JN165086, JN165088 represent the complete
CC genome of African cassava mosaic virus-Ghana.
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FH Key Location/Qualifiers
FH
FT source 1. .2725
FT /organism="African cassava mosaic virus-Ghana"
FT /segment="DNA-B"
FT /host="cassava"
FT /isolate="ACMV"
FT /ecotype="Ghanian Cassava"
FT /mol_type="genomic DNA"
FT /country="Ghana"
FT /collection_date="2008"
FT /db_xref="taxon:1077906"
FT gene 443. .1213
FT /gene="bv1"
FT CDS 443. .1213
FT /codon_start=1
FT /gene="bv1"
FT /product="BV1"
FT /protein_id="AEL28896.1"
FT /translation="MYSIRKQSRNFLRKYNSNTTNRYPIRRKYVAGHTRPCVRRRLSYE
FT PVERPLVHNVLCEKQHGDVFKLQQNTSYTSFVTYPSRGSSGDGRCRDYIKLQSMSVSGV
FT IHAKANGNDDPMEVSPVVNGVFVFSLIMDTKPYLPAGVQALPTFEELFGAYSACYVNLR
FT LLNNQQHRYRVLHSVKRFVSSSGDTKVSQFRFNKRLSTRRYTIWASFHDGDLGNAGGNY
FT RNISKNAILVSYAFVSEHSMSCDPFVQIETSYVG"
FT gene complement(1222. .2118)
FT /gene="bc1"
FT CDS complement(1222. .2118)
FT /codon_start=1
FT /gene="bc1"
FT /product="BC1"
FT /protein_id="AEL28897.1"
FT /translation="MDTSVPVISSEYIQSARTEYKLTNDESPITLQFPSTLERTRVRIM
FT GKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYFSA
FT SYFSIDDNVPWQLLYKVEDSNVKNGVTFAQIKAKLKLSAAKHSTDIKFKQPTIKILSKD
FT YGPDCVDFWSVGKPKPIRRLIQNEPGTDYDTGPKYRPITVQPGETWATKSTIGRSTSMR
FT YTGPRPIDIDASSSRQYASEAEFPLRGLHQLPEASLDPGDSVSQTQSMSKRDIESIIEQ
FT TVNKCLIAHRGSSHKDL"
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SQ Sequence 2725 BP; 762 A; 492 C; 626 G; 845 T; 0 other;
jn165086 Length: 2725 25-AUG-2011 Type: N Check: 4822 ..
1 taatattacc ggttggcccc gcccctcttt aaatgtggtc cccgcgcact
51 tgatggccgc gccctccttt gaaagtggtt ccccaccttt ttcactttcc
101 tacagatact acggtggtcc ccgcatgcag gtgttgtctg ctatggctat
151 tgcatgtgtg tcccacatgc aaataaagga tatgcgggcc tatcgaatga
201 cagcttgtgc tactaaatta tatttagtat attgtgcatt cctctgagcg
251 taataaaatg gtagatttta tttaacgttt aatattagcc attcgatatt
301 agtgatttat agtcatcaat ccgacaacga ccatgaagga caattaaggc
351 gagtagcgga attgttgatg tattatatat agggtgctaa catacaggag
401 tttgagaata tcatttatcg gaagtatata cagggatttg taatgtatag
451 tatcaggaag cagtcaagaa attttctaag gaaatataac agcaatacca
501 ctaacaggta tcccatcagg cgtaagtatg ttgctgggca tactagacca
551 tgtgttaggc gaagattgtc atatgagcca gtggagagac cgttggtcca
601 taatgtgttg tgtgagaagc aacatggtga tgtgtttaag ttgcagcaga
651 acacaagtta cacgtcattt gtgacgtatc cgtccagggg atcatctggt
701 gatgggcgtt gtcgggatta catcaagctg caaagtatgt ctgtctcggg
751 agtgatacat gcgaaggcta atggcaatga tgatcctatg gaggtgtcgc
801 ctgtggttaa tggagtgttc gtgtttagct taatcatgga cacaaagcct
851 tatttacctg caggtgttca agctcttcct acatttgaag agctgttcgg
901 agcatattcc gcttgttatg ttaatttaag attattgaat aatcaacagc
951 atcgatatag ggtattgcac agcgtgaaac gtttcgtgtc atcttcagga
1001 gatactaagg tatctcaatt taggtttaat aagcgattga gcaccaggcg
1051 atatactatt tgggcatcat tccatgatgg ggatctggga aatgcagggg
1101 gaaattatag gaacataagc aagaatgcta ttcttgtcag ttatgcgttt
1151 gtatcagagc attcaatgtc ttgtgatcca tttgtacaaa tagaaacatc
1201 ctatgttgga tgatttatta atcataaatc tttatggcta ctgcctctat
1251 gtgctattaa gcacttgttt acagtttgtt caataatgct ttcaatgtcc
1301 cttttcgaca tggactgggt ttgtgaaact gagtcccctg gatcgaggga
1351 agcttcaggt agctggtgta gccctcgaag tgggaattct gcctcagatg
1401 catattgcct ggaggatgag gcgtcgatgt caattggtct tgggccggtg
1451 tatctcatgc ttgtagagcg cccaatcgtg gattttgtag cccatgtttc
1501 tcctggttgg accgtgatgg gcctatattt aggcccagtg tcataatctg
1551 tgccgggctc attttgaatg agccttcgaa tgggcttagg ttttccaacg
1601 gaccagaagt cgacacagtc aggtccatag tctttggata gtatttttat
1651 agtgggctgt ttaaatttaa tgtccgttga atgtttggca gcggacagct
1701 tcagttttgc cttaatttgg gcaaatgtga ctccattctt tacgttggag
1751 tcttcaacct tatacagcag ctgccatggt acgttatcat caattgaaaa
1801 gtatgatgca gagaaataat gcaggtccac attacaccct atgggaaatg
1851 tgaattgggc ttgatcctgt tgctcatcac tgagcctcgt gtccctaatg
1901 gtaacaataa cagaaccttg tgcattaaag ggcacttgat tcctgtactc
1951 aatgacgaca tggtctacct tcatgcattt gcccatgata cgtacccttg
2001 ttcgttcaag ggtcgaagga aattgaagtg taatcggcga ttcatcattc
2051 gtcagtttgt attctgtcct tgcagattga atatattcgc tggagatgac
2101 aggtacagat gtatccatgt tcaacactct gatgataagc ttgtcaaagc
2151 cacaacacct gtcgcatgag aaacatgatt aatctattgt aaaactggcc
2201 gcgcagcgga atggccttaa tgcaagataa agcagaagat gttgtccaca
2251 ggataaatag atttgagaaa tatagacata tatttcttat cctaccggaa
2301 aaatgcgtcg atgtgtaatc caattcaaat atatatatag gcatacagca
2351 ttattcgatt aaatatatat ttagagatat gtaccttatc aaaacgggaa
2401 ttggatatct gctggagtgg aatgtggata gtcctattag caaagtggtc
2451 atataaatat ggtttatata tttattaagg agttatccaa cgagtgatag
2501 tttacgtggt tagatttgca cgttgaaatc taaaataagc aattacatta
2551 tagtgagaga aagttagaga gagacgctct caactggaga cactcttgag
2601 catctcctcc tgttaattgg agacattata tagttgtctc taaatggcat
2651 tcttgtaata agttgaactt taatttgaag taaaagtctc aataggtaca
2701 gaacacccaa ggggccaacc gtata