Sequence of DPV Mungbean yellow mosaic India virus

Mungbean yellow mosaic India virus isolate Guntur pre-coat protein (AV2) gene, partial cds; and coat protein (AV1) gene, complete cds.

ACC No: JN181003

Dated: 2011-11-13 | Length: 920 | CRC: 75126092

                
ID   JN181003; SV 1; linear; genomic DNA; STD; VRL; 920 BP.
XX
AC   JN181003;
XX
DT   13-NOV-2011 (Rel. 110, Created)
DT   13-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Mungbean yellow mosaic India virus isolate Guntur pre-coat protein (AV2)
DE   gene, partial cds; and coat protein (AV1) gene, complete cds.
XX
KW   .
XX
OS   Mungbean yellow mosaic India virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-920
RA   Obaiah S., Bhaskara Reddy B.V., Sivaprasad Y., Eswara Reddy N.P.,
RA   Vijay Krishna Kumar K., Raja Reddy K.;
RT   "Molecular Characterization of Mungbean Yellow Mosaic India Virus infecting
RT   Blackgram in Andhra Pradesh, India";
RL   Unpublished.
XX
RN   [2]
RP   1-920
RA   Obaiah S., Bhaskara Reddy B.V., Sivaprasad Y., Eswara Reddy N.P.,
RA   Vijay Krishna Kumar K., Raja Reddy K.;
RT   ;
RL   Submitted (21-JUN-2011) to the INSDC.
RL   Plant Pathology, Institute of Frontier Technologies, Regional Agricultural
RL   Research Station, Tirupati, Andhra Pradesh 517502, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .920
FT                   /organism="Mungbean yellow mosaic India virus"
FT                   /segment="DNA A"
FT                   /host="Vigna mungo (L.) Hepper (blackgram)"
FT                   /isolate="Guntur"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Guntur, Andhra Pradesh"
FT                   /collection_date="12-Feb-2011"
FT                   /note="acronym: MYMIV"
FT                   /db_xref="taxon:223287"
FT   gene            <1. .297
FT                   /gene="AV2"
FT   CDS             <1. .297
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="pre-coat protein"
FT                   /protein_id="AET09936.1"
FT                   /translation="SRCMLAIKYLQQVQENYPSNSVGYSYLTGLIQVLRIRNHAKADLR
FT                   YCLLYPDIECTEEIELRYPAHAPCFCGRCPYQHEKEALDQPPHVEETSVLPTV"
FT   gene            116. .889
FT                   /gene="AV1"
FT   CDS             116. .889
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /note="role in encapsidation of virus particles"
FT                   /protein_id="AET09937.1"
FT                   /translation="MPKRTYDTAFSTPISNARRRLNFDTPLMLPASAGGVLTNMKRRRW
FT                   TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEQRHDIAHTGKVICISDVTRGNGITH
FT                   RIGKRFCIKAVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPFGTPMDFGQVFNMYDNE
FT                   PSTATVKNDLRDRYQVLRKFNATVTGGQYACKEQAMVNRFFKVNNYVVYNHQEAAKYEN
FT                   HTENALLLYMACTHASNPVYATLKIRIYFYDSILN"
XX
SQ   Sequence 920 BP; 263 A; 186 C; 208 G; 263 T; 0 other;

jn181003 Length: 920  13-NOV-2011  Type: N  Check: 8071  ..

       1  tcccggtgca tgttggcaat aaagtatttg cagcaagttc aagagaatta
      51  tccttctaat tctgttggtt attcgtacct tacagggtta attcaggtat
     101  tgcgcatccg gaatcatgcc aaagcggacc tacgatactg ccttctctac
     151  cccgatatcg aatgcacgga ggagattgaa cttcgatacc ccgctcatgc
     201  tccctgcttc tgcgggaggt gtccttacca acatgaaaag gaggcgttgg
     251  accaaccgcc ccatgtggag gaaacctcgg ttttaccgac tgtataggtc
     301  ccctgatgtc cctcgtggtt gtgagggacc atgtaaagtt caatcatttg
     351  agcaaaggca tgatattgcc cacacaggca aagtgatttg catatcggac
     401  gtgactagag gtaatggaat tacacatcgt attggcaaac gtttttgcat
     451  caaggccgtg tacattacgg ggaaggtttg gatggacgaa aacattaagt
     501  ccaaaaatca cacgaacact gtgatgttca agttatgtcg tgacagacga
     551  ccatttggta cacccatgga ttttggtcaa gtttttaaca tgtatgacaa
     601  cgagccaagt acagctactg tgaagaacga tctgcgtgat cgttatcaag
     651  tcttgcgaaa gtttaatgcc actgttactg gtggccaata tgcttgtaag
     701  gaacaagcca tggtgaatcg ttttttcaaa gttaataatt atgttgttta
     751  caaccaccag gaggcagcga agtatgagaa ccatactgag aacgcattat
     801  tattgtatat ggcatgtact catgcctcaa atcctgtgta tgcaacactt
     851  aaaattcgga tctattttta tgattcgata ttgaattaat aaagtttgta
     901  ttgaacatta tgcgtaaagc