Sequence of DPV Tomato yellow leaf curl virus

Tomato yellow leaf curl virus isolate 20090109-46 capsid protein gene, complete cds.

ACC No: JN182213

Dated: 2011-11-20 | Length: 777 | CRC: 673133427

                
ID   JN182213; SV 1; linear; genomic DNA; STD; VRL; 777 BP.
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AC   JN182213;
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DT   20-NOV-2011 (Rel. 110, Created)
DT   20-NOV-2011 (Rel. 110, Last updated, Version 1)
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DE   Tomato yellow leaf curl virus isolate 20090109-46 capsid protein gene,
DE   complete cds.
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KW   .
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OS   Tomato yellow leaf curl virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-777
RA   Guerere P., Romay G., Chirinos D.T., Geraud F., Santana M.A., Franco M.A.,
RA   Galindo I.;
RT   "Experimental transmission of Tomato yellow leaf curl virus (TYLCV) to
RT   Amaranthus dubius by Bemisia tabaci (Hemiptera: Aleyrodidae)";
RL   Unpublished.
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RN   [2]
RP   1-777
RA   Guerere P., Romay G., Chirinos D.T., Geraud F., Santana M.A., Franco M.A.,
RA   Galindo I.;
RT   ;
RL   Submitted (25-JUN-2011) to the INSDC.
RL   Centro de Biotecnologia, Instituto de Estudios Avanzados, Carretera
RL   Nacional Hoyo de la Puerta-Baruta, Sartenejas, Caracas, Baruta 1080,
RL   Venezuela
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FH   Key             Location/Qualifiers
FH
FT   source          1. .777
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /lab_host="Amaranthus dubius"
FT                   /isolate="20090109-46"
FT                   /mol_type="genomic DNA"
FT                   /country="Venezuela"
FT                   /collected_by="D. Chirinos, P. Guerere, F. Geraud"
FT                   /collection_date="09-Sep-2009"
FT                   /PCR_primers="fwd_name: kl04-06_tylcvcp, fwd_seq:
FT                   gccgccgaattcaagcttactatgtcgaag, rev_name: kl04-07_tylcvcp,
FT                   rev_seq: gccgcccttaagttcgaaactcatgatata"
FT                   /note="TYLCV mild strain transmission mediated by putative
FT                   species MEAM1 of Bemisia tabaci"
FT                   /db_xref="taxon:10832"
FT   CDS             1. .777
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /note="viral coat protein"
FT                   /protein_id="AET41714.1"
FT                   /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW
FT                   TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH
FT                   RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN
FT                   EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE
FT                   NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN"
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SQ   Sequence 777 BP; 235 A; 150 C; 182 G; 210 T; 0 other;

jn182213 Length: 777  20-NOV-2011  Type: N  Check: 6084  ..

       1  atgtcgaagc gaccaggcga tataatcatt tccacgcccg cctcgaaggt
      51  tcgccgaagg ctgaacttcg acagcccata cagcagccgt gctgctgtcc
     101  ccattgtcca aggaacaaac aagcgacgat catggacgta caggcccatg
     151  taccggaagc ccagaatata cagaatgtat cgaagccctg atgttccccg
     201  tggatgtgaa ggcccatgta aagtacagtc ttatgagcaa cgggatgata
     251  ttaagcatac tggtattgtt cgttgtgtta gtgatgttac tcgtggatct
     301  ggaattactc acagagtggg taagaggttc tgtgttaaat cgatatattt
     351  tttaggtaaa gtctggatgg atgaaaatat caagaagcag aaccacacta
     401  atcaggtcat gttcttcttg gtccgtgata gaaggcccta tggaaacagc
     451  ccaatggatt ttggacaggt ttttaatatg ttcgataatg agcccagtac
     501  cgcaacagtg aagaatgatt tgcgggatag gtttcaagtg atgaggaaat
     551  ttcatgctac agttattggt ggaccctctg gaatgaagga acaggcatta
     601  gttaagagat tttttagaat taacagtcat gtaacttata atcatcagga
     651  ggcagccaag tacgagaacc atactgaaaa cgccttgtta ttgtatatgg
     701  catgtacgca tgcctctaat ccagtgtatg caactatgaa aatacgcatc
     751  tatttctatg attcaatatc aaattaa