Sequence of DPV Tomato leaf curl New Delhi virus
Tomato leaf curl New Delhi virus isolate India:Ash gourd:2011 segment DNA-B, complete sequence.
ACC No: JN208137
Dated: 2012-01-09 | Length: 2694 | CRC: -1369247581
ID JN208137; SV 1; circular; genomic DNA; STD; VRL; 2694 BP.
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AC JN208137;
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DT 09-JAN-2012 (Rel. 111, Created)
DT 09-JAN-2012 (Rel. 111, Last updated, Version 1)
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DE Tomato leaf curl New Delhi virus isolate India:Ash gourd:2011 segment
DE DNA-B, complete sequence.
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KW .
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OS Tomato leaf curl New Delhi virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2694
RA Roy A., Panwar G., Gangopadhyay K., Prasad T.V.;
RT "Detection and characterization of Tomato leaf curl New Delhi virus
RT infecting Ash gourd in India";
RL Unpublished.
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RN [2]
RP 1-2694
RA Roy A., Panwar G., Gangopadhyay K., Prasad T.V.;
RT ;
RL Submitted (05-JUL-2011) to the INSDC.
RL Germplasm Evaluation Division, National Bureau of Plant Genetic Resources,
RL New Delhi, India, Pusa, New Delhi, Delhi 110012, India
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FH Key Location/Qualifiers
FH
FT source 1. .2694
FT /organism="Tomato leaf curl New Delhi virus"
FT /segment="DNA-B"
FT /host="Benincasa hispida (ash gourd)"
FT /isolate="India:Ash gourd:2011"
FT /mol_type="genomic DNA"
FT /country="India:New Delhi"
FT /collection_date="2011"
FT /clone="21"
FT /db_xref="taxon:223347"
FT gene 442. .1248
FT /gene="BV1"
FT CDS 442. .1248
FT /codon_start=1
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /protein_id="AEX15670.1"
FT /translation="MAFPSPYPTPRRSGYPFNRTYNGNKSFRLWKSRKNQNWKRYRSTH
FT YISRSPTELFGDPISKQYTRKEICETQEGSEYLLHNNRYMTSYVSYPAKTRTGTNNRVR
FT SYIKLKSLNLSGTFAVRKSDVMTEALQTNGLYGVMSVVVVRDKSPKIYSATQPLIPFVE
FT LFGSVNACRGSLKVAERHHERFVLLNQTSIVVNTPHSNAIKKFCIRNCIPRTYTTWVTF
FT KDEEEDSCTGLYSNTLRNAIILYYVWLSDVPSQVDLYSNVILNYIG"
FT gene complement(1303. .2151)
FT /gene="BC1"
FT CDS complement(1306. .2151)
FT /codon_start=1
FT /gene="BC1"
FT /product="movement protein"
FT /protein_id="AEX15671.1"
FT /translation="MSIGNEGMGMGVGGYIQSERVEYALTNDAAEVTLSFPSMFEQKIS
FT QLRNRCMKIDHVVLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHY
FT YSSSFFSLKDKNPWRVEYRVENTNVVNGVHFCKMLGKLKLSSAKHSTDVEFRPPKIEIQ
FT TKEFTVNDIDFWSVGSKPQTRRLVDGSKLMGHSSRSLRVPYLAIGPNESWASRSEIGLS
FT SVTSRPYKNLSGLDDSAIDPGPSASQAGSITREEIADIITKTVEQCIKSNVNAPVSKGV
FT "
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SQ Sequence 2694 BP; 754 A; 624 C; 510 G; 806 T; 0 other;
jn208137 Length: 2694 09-JAN-2012 Type: N Check: 6183 ..
1 accgaaaggc cgcgaaaatt tttcccccct atcctgaccg ttgctccgca
51 atcattgcat gccgctaccc gtccgattag caacacgtgt atcccactaa
101 cagactttat gcaaataaat gtctgaactg cgtctattta atacatatgt
151 ggtccccata tgtcttgtcg tacatctatt atgtgcgtgt gtggtccccc
201 cgcactatat aaagtcattg acataaagca aattgccttc tttgctatat
251 gtattttgat cggtcgagat caaaattaat ttgttgggaa catgtcagtc
301 gtccgatctt atgagatatg ctttaattca aacaatactt gtttgaattt
351 tatccacgcc ttaaaatact aatttataaa actgctacat atatgacatt
401 acatggtttt gtcattgcca catattttcc atcccagcta aatggctttt
451 ccttctcctt atcccacccc tcgccgttcc ggttaccctt tcaacagaac
501 atacaacgga aacaagagtt tccgcttgtg gaagtcccgg aagaatcaaa
551 actggaaacg ctatcgcagt actcattaca tatcacgttc tccaaccgaa
601 ctgtttggcg atccaatctc caaacaatat acgcgtaagg aaatctgtga
651 aacacaggag gggtcggagt atcttctcca caacaatcgt tacatgacat
701 catatgtctc ttatccggcc aagaccagaa ctggaacgaa caaccgcgtt
751 cgttcctata tcaagttaaa gagtttgaac ctatccggga catttgccgt
801 tcgaaagtcg gatgtgatga cggaagctct gcagacaaac ggactttacg
851 gggtgatgtc tgtagttgtg gtccgcgata aatctccaaa gatttattct
901 gcgacgcaac ccttgatacc gtttgttgaa ctgtttggat cagttaatgc
951 atgcagggga agtctgaaag tggcagaacg ccatcacgaa cgtttcgtac
1001 tgctgaatca aacatccatc gtcgtcaata ccccacattc caacgctatc
1051 aagaaattct gcattcgtaa ctgcatccca agaacttaca caacctgggt
1101 aacgttcaag gacgaagaag aagatagctg tactggacta tattctaaca
1151 ccctccgaaa tgcaattatt ttgtattatg tatggttaag cgatgtaccc
1201 tcacaagtcg atctatatag caatgtaatt cttaattaca ttggataatg
1251 tattgaagat gcacaaggaa tattttattc atgaataaat ttgacttaaa
1301 atttattaca cgcccttgga tactggagca tttacattag attttataca
1351 ttgctctaca gtcttcgtaa ttatgtccgc aatctcttcc ctcgtaatac
1401 tccccgcctg tgatgccgat ggacctggat cgattgccga atcgtccagt
1451 ccgctcaggt ttttgtatgg tctgctggtg acggacgaaa gtccgatctc
1501 cgatctgctt gcccatgact cgttcggacc tattgccaga tatggtactc
1551 tcaacgatct tgaactatgt cccattaact ttgaaccatc gacaagacgc
1601 cttgtttgtg gttttgaacc cactgaccag aaatcaatgt cgttaacggt
1651 gaattccttg gtctgtattt ctatcttcgg tggtcggaat tctacgtcag
1701 tggaatgttt tgccgacgac agcttcaatt tccccagcat cttacagaaa
1751 tgcaccccat tcacgacgtt tgtgttctca accctgtatt ccactctcca
1801 aggattctta tccttgagag agaagaatga ggaagagtag tagtgcaggt
1851 tgcagttgca tttgattgga attgtgaatt ctgcttgttt cgtgtctcct
1901 tccgtcaatc tcatgtcgtg tatctctatc acgacatgac caacagcatt
1951 aatcggaacc tgactgcgat attccagtac tacgtgatct attttcatgc
2001 atctgttcct cagctggcta atcttctgct cgaacattga aggaaatgac
2051 aaggtgacct ctgcagcatc gtttgtcagc gcgtactcaa cgcgctcaga
2101 ttggatatac ccacctacgc ccatacccat accttcattt cctattgaca
2151 tattggccgc gcagcgcaac acccactgaa acacaggagg acagactacg
2201 atcagagaaa ccccaacgaa gaagaaaccc tagcaaacaa cgaagttgtt
2251 ttgcaaagga cggaggcaga tggttttata attcttttgc atgtcatgtc
2301 tatgtcatac caaataccct aaaatgaacg gcacatattt ttctacgaaa
2351 aagtaaatgt gcctgtatat ctactaattg acatatatca tatatatatt
2401 ggaagcccaa tttatgttaa ttgggctgat gtataaattc agaagaagcc
2451 catgaaattg gcccagcatg aagtccgttt ctataacgac gtcgcgttga
2501 tctcttatgt tagcaaaagc tagagagaag caagagtttc tctctctaga
2551 caccttattg gcgtcccgca tctttctcat ataattggtg tatggagtcc
2601 tatatatagg taggacacta tatggcatta ttgtaatttt ggtaacaaaa
2651 ttactttaat tcaaattccc tatagcggcc tttcgtctaa tatt