Sequence of DPV Banana bunchy top virus

Banana bunchy top virus isolate Bangalore-GKVK segment DNA6, complete sequence.

ACC No: JN243754

Dated: 2011-12-11 | Length: 1093 | CRC: -573865418

                
ID   JN243754; SV 1; linear; genomic DNA; STD; VRL; 1093 BP.
XX
AC   JN243754;
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DT   11-DEC-2011 (Rel. 111, Created)
DT   11-DEC-2011 (Rel. 111, Last updated, Version 1)
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DE   Banana bunchy top virus isolate Bangalore-GKVK segment DNA6, complete
DE   sequence.
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KW   .
XX
OS   Banana bunchy top virus
OC   Viruses; ssDNA viruses; Nanoviridae; Babuvirus.
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RN   [1]
RP   1-1093
RA   Wickramaarachchi W.A.R.T., Rangaswamy K.T., Shankarappa K.S.,
RA   Shivakumar C., Ghosh S., Basavaraj S.;
RT   "Molecular characterization of banana bunchy top virus (BBTV) from
RT   Bangalore (GKVK), India";
RL   Unpublished.
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RN   [2]
RP   1-1093
RA   Wickramaarachchi W.A.R.T., Rangaswamy K.T., Shankarappa K.S.,
RA   Shivakumar C., Ghosh S., Basavaraj S.;
RT   ;
RL   Submitted (11-JUL-2011) to the INSDC.
RL   Department of Plant Pathology, GKVK Campus, University of Agricultural
RL   Sciences, New Airport Road, Bangalore, Karnataka 560065, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1093
FT                   /organism="Banana bunchy top virus"
FT                   /segment="DNA6"
FT                   /host="Musa sp. (banana)"
FT                   /isolate="Bangalore-GKVK"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /isolation_source="infected leaves"
FT                   /collected_by="W.A.R.T. Wickramaarachchi"
FT                   /collection_date="25-Mar-2009"
FT                   /identified_by="W.A.R.T. Wickramaarachchi"
FT                   /db_xref="taxon:12585"
FT   CDS             277. .747
FT                   /codon_start=1
FT                   /product="nuclear shuttle protein"
FT                   /protein_id="AEV41142.1"
FT                   /translation="MDWAESQFKTCTHGCDWKKISSDSADNRQYVPCVDSGAGRKSPRK
FT                   VLLRSIEAVFNGSLSFSGNNRNVRGFLYVSIRDDDGEMRPVLIVPFGGYGYHNDFYYFE
FT                   GKGKVECDISSDYVAPGIDWSRDMEVSISNSNNCNELCDLKCYVVCSLRIKE"
XX
SQ   Sequence 1093 BP; 372 A; 172 C; 253 G; 296 T; 0 other;

jn243754 Length: 1093  11-DEC-2011  Type: N  Check: 7781  ..

       1  agcacggggg actattatta ccccccgtgc tcgggacggg acatgacgtc
      51  agcaaggatt ataatgggct ttttattagc ccatttattg aattgggccg
     101  ggttttgtca ttttacaaaa gcccggtcca ggataagtat aatgtcacgt
     151  gccgaataaa aggttgcttc gcctcgaaga aacctaattt gaggttgcgt
     201  attcaatacg ctaccgagta tctattaata tgtgagtctc tgccgaaaca
     251  atcagagcga aagcaaagca gaagcgatgg attgggcgga atcacaattc
     301  aagacttgta ctcatggatg cgattggaag aagatatcat cggattcagc
     351  cgataatcga caatatgtac catgcgtcga ttctggagct ggaagaaagt
     401  cgcctcgcaa ggtacttctt agatctattg aagctgtgtt taacggaagc
     451  ttaagcttca gcggaaataa taggaacgtt cgtggatttc tctacgtatc
     501  gatcagagac gatgacggag aaatgcgtcc agtactcata gtacccttcg
     551  gaggatatgg atatcataat gatttctatt atttcgaagg aaaggggaaa
     601  gttgaatgtg atatatcatc agattatgtt gcgccaggaa tagattggag
     651  cagagacatg gaagttagta ttagtaacag caacaactgt aatgaattat
     701  gtgatctgaa gtgttatgtt gtttgttctt taagaatcaa ggaataaaag
     751  ttgtgctgta atgtttatta ataaaacgta tatttgggaa atagatagtt
     801  gtatacaaca tacaacacac tatgaaatac aagacgctat gacaaatgta
     851  cgggtatctg aatgagtttt agtatcgctt aagggccgca ggcccgttga
     901  aaaataataa tcgaattata aacgttagat aataatcaga gataggtgat
     951  cagataacat aaacataaac gaagtatatg gcggtacaat aataaaataa
    1001  gttaaaaaaa aaaacataat gaatactaat ttctgattgg ttcagaagaa
    1051  aggcccacca actaaaaggt ggggagaatg tcccgatgac gta