Sequence of DPV Quaranfil virus

Quaranfil virus isolate EG T 377 hypothetical protein gene, complete cds.

ACC No: JN412853

Dated: 2011-12-21 | Length: 1726 | CRC: 694030024

                
ID   JN412853; SV 1; linear; viral cRNA; STD; VRL; 1726 BP.
XX
AC   JN412853;
XX
DT   21-DEC-2011 (Rel. 111, Created)
DT   21-DEC-2011 (Rel. 111, Last updated, Version 1)
XX
DE   Quaranfil virus isolate EG T 377 hypothetical protein gene, complete cds.
XX
KW   .
XX
OS   Quaranfil virus
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
OC   unclassified Orthomyxoviridae.
XX
RN   [1]
RP   1-1726
RA   Presti R.M., Virgin H.W.IV., Wang D.;
RT   "Quaranfil ICTV submission";
RL   Unpublished.
XX
RN   [2]
RP   1-1726
RA   Presti R.M., Virgin H.W.IV., Wang D.;
RT   ;
RL   Submitted (29-JUL-2011) to the INSDC.
RL   Medicine, Washington University School of Medicine, 660 South Euclid, Box
RL   8051, St. Louis, MO 63110, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1726
FT                   /organism="Quaranfil virus"
FT                   /segment="4"
FT                   /host="Argas reflexus"
FT                   /isolate="EG T 377"
FT                   /mol_type="viral cRNA"
FT                   /country="Afghanistan"
FT                   /collection_date="Sep-1968"
FT                   /PCR_primers="fwd_name: qf_orf_f, fwd_seq:
FT                   ggatcctgctccatcaactg, rev_name: qf_orf_r, rev_seq:
FT                   cagttggaccagtagatttcaccc"
FT                   /db_xref="taxon:688436"
FT   CDS             51. .1634
FT                   /codon_start=1
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:G9HXM2"
FT                   /protein_id="AEW22798.1"
FT                   /translation="MEVDPAPSTAPKPTRKRVNNSGEEIGSGGKRALTGLSLTQKVAIH
FT                   HAIALMVYHVVIDIFKCTIIDLITDVNIGVYAMNQIWSIHNYFRTKNNSGRSSIGAKID
FT                   NATDTYQFILHGRTITVNKEELKGVYKRCITTYFDWDKMNDWMGSVHTIMALWNLFGSR
FT                   LSEVRIMPSANTISVEKDNRTTVVKDFNQYGIPAGMRHFATGADFKPTMKSALAQSMGP
FT                   VTVLVQLSEAKDNQYAGKWVDALKRAFSHIPHIDQIAKFMLANKPAVLTKINGYLMAIA
FT                   GYTGTREQKRIAFPPGTLAYLLHDLDKENKLHFNEDRCSKFDFSGAGAFRMYSHFLKVC
FT                   KKNPLRMNIADPGKARQLLFHTMFGTHVEDFGILQSMTDVSDWLKRKDFEEEFKTLRAS
FT                   HARVEGNFYPIEMRYYSKVCSSLNTKMIGGGSAPVTNCQIFSGNRKRIVTEGLKSLGQQ
FT                   GVGAGLSALDKDSIEKLLREHLESIKAAFGDSFEAGTVKWRKFDGLTWDKEGDEVEMRP
FT                   GEVGEIYWSN"
XX
SQ   Sequence 1726 BP; 488 A; 397 C; 454 G; 387 T; 0 other;

jn412853 Length: 1726  21-DEC-2011  Type: N  Check: 6501  ..

       1  gcaatcacat ctcattttgt ttcctcacta gcagcaccag cccaagggaa
      51  atggaggtgg atcctgctcc atcaactgcc ccaaagccca cacggaagag
     101  agtgaacaac tctggagaag aaatcgggtc cggggggaaa agggctctga
     151  ctgggctatc cctcacccag aaggttgcaa ttcatcatgc cattgctctg
     201  atggtgtacc atgtggtcat cgacatcttc aagtgcacca taatagatct
     251  gatcacagat gtgaatattg gggtgtacgc catgaatcag atttggtcca
     301  ttcacaatta cttccggacc aagaacaaca gcgggaggag ctccattggt
     351  gcaaagatag acaatgcaac ggatacttac caattcattc ttcatgggag
     401  aaccatcact gtgaacaaag aagaactgaa gggagtgtac aagaggtgta
     451  tcaccactta cttcgactgg gacaagatga atgactggat ggggagtgtt
     501  cataccatca tggctctgtg gaacctcttt ggctcgcggc tcagtgaagt
     551  gcgcattatg cccagcgcca acacaataag tgtggaaaag gacaaccgaa
     601  ctacggtggt gaaagacttc aaccagtatg gaatccctgc gggaatgaga
     651  cactttgcta ctggggccga tttcaagccc accatgaagt cagcattggc
     701  tcaatccatg ggaccagtga cagtcttggt gcagctgtcc gaggccaaag
     751  acaaccagta cgcagggaaa tgggtggatg ccctaaagcg ggctttttcg
     801  cacatccccc acatcgacca gattgccaag ttcatgctcg ccaacaagcc
     851  tgctgtcctc accaaaatca atggatacct aatggccatc gccggataca
     901  cgggcactag agagcagaag aggattgctt tcccacctgg caccctcgca
     951  tacttgctgc atgatctaga caaggaaaac aaactccatt tcaatgagga
    1001  ccgctgctcc aaatttgact tctctggggc tggagccttt cggatgtatt
    1051  ctcattttct caaggtatgc aaaaagaacc cattgagaat gaatatcgca
    1101  gacccgggga aagcacggca gctcctcttc cacactatgt ttgggaccca
    1151  tgtagaagac tttgggatcc tccaatccat gacagacgtc agcgactggc
    1201  tgaagagaaa agattttgag gaggagttta aaactctccg tgcaagtcat
    1251  gctcgagttg agggcaactt ctacccaata gagatgagat attactccaa
    1301  ggtctgctcc agcctcaaca ccaagatgat tgggggcggg tctgctccgg
    1351  tgacaaattg tcaaattttc tcaggaaatc ggaaaaggat agttactgaa
    1401  ggcctcaaga gtcttggaca gcaaggggtg ggggctggct tgtcagcact
    1451  tgataaggat tccattgaga agctactaag ggagcatctt gaatcaatca
    1501  aagcagcctt cggcgacagt tttgaggcag ggactgttaa gtggcggaaa
    1551  tttgatgggc tcacctggga caaagaggga gacgaagttg agatgaggcc
    1601  tggggaagtg ggtgaaatct actggtccaa ctgaaggggg caattcaagt
    1651  caaagggggc gatgccaagt ttattcattg tgggcctgct gcattgctga
    1701  taggaaaaaa tgagattgtg attgct