Sequence of DPV Bean golden mosaic virus
Bean golden mosaic virus isolate BR:Car3:10 segment DNA-A, complete sequence.
ACC No: JN419003
Dated: 2012-03-20 | Length: 2614 | CRC: 719618614
ID JN419003; SV 1; circular; genomic DNA; STD; VRL; 2614 BP.
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AC JN419003;
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DT 20-MAR-2012 (Rel. 112, Created)
DT 20-MAR-2012 (Rel. 112, Last updated, Version 1)
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DE Bean golden mosaic virus isolate BR:Car3:10 segment DNA-A, complete
DE sequence.
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KW .
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OS Bean golden mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2614
RA Silva S.J.C., Castillo-Urquiza G.P., Hora B.T.Jr., Assuncao I.P.,
RA Lima G.S.A., Pio-Ribeiro G., Mizubuti E.S.G., Zerbini F.M.;
RT "Species diversity, phylogeny and genetic variability of begomovirus
RT populations infecting leguminous weeds in northeastern Brazil";
RL Plant Pathol. 0:0-0(2011).
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RN [2]
RP 1-2614
RA Silva S.J.C., Castillo-Urquiza G.P., Hora B.T.Jr., Assuncao I.P.,
RA Lima G.S.A., Pio-Ribeiro G., Mizubuti E.S.G., Zerbini F.M.;
RT ;
RL Submitted (31-JUL-2011) to the INSDC.
RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n,
RL Vicosa, Minas Gerais 36570-000, Brazil
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FH Key Location/Qualifiers
FH
FT source 1. .2614
FT /organism="Bean golden mosaic virus"
FT /segment="DNA-A"
FT /host="Macroptilium lathyroides"
FT /isolate="BR:Car3:10"
FT /mol_type="genomic DNA"
FT /country="Brazil"
FT /collection_date="05-Jan-2010"
FT /db_xref="taxon:10839"
FT CDS 198. .953
FT /codon_start=1
FT /product="coat protein"
FT /note="CP"
FT /protein_id="AFD54481.1"
FT /translation="MVKRDAPWRHMAGTAKISRSSNYSPRSGNGSRYNKAAEWVNRPMY
FT RKPRIYRTMRGPDVPRGCEGPCKVQSFEQRHDVSHVGKVICLSDVTRGNGITHRVGKRF
FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPLEFGQVFNMFDNEPSTATV
FT KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAAKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSISN"
FT CDS complement(950. .1348)
FT /codon_start=1
FT /product="replication-enhancer protein"
FT /note="REN"
FT /protein_id="AFD54482.1"
FT /translation="MDSRTGERITARQAENGVYIWEISNPLYFKMYNVEDPLHTTTRIY
FT HIQIRFNHNLRNKLGLHKAFLNFQVWTISLQASGTTYLNRFKYLVSLYLDRIGVISLNN
FT VIRAVRFATDKSYVNYVLENHEIKFKFY"
FT CDS complement(1095. .1484)
FT /codon_start=1
FT /product="transactivating protein"
FT /note="TRAP"
FT /protein_id="AFD54483.1"
FT /translation="MRNSSSSTPPSIKVQHRAAKKRAIRRRRVDLECGCTIYVHINCSG
FT HGFTHRGTHHCTSSREWRVYLGDIKSPLFQDVQRRGSTSHHDQNIPHTNTVQPQPQEQT
FT GSTQGFPEFPSLDDISSSFWDDIFK"
FT CDS complement(1396. .2481)
FT /codon_start=1
FT /product="replication-associated protein"
FT /note="REP"
FT /protein_id="AFD54480.1"
FT /translation="MPPPKRFKISAKNYFLTYPQCSITKECALEQLQQIETPVNKKYIR
FT ICKELHDNGEPHLHALIQFEGKFQCTNCRFFDLRHPLTSSVSHANIQSAKSSSDVKSYI
FT EKDGDYIEWGAFQVDGRSARGGQKTANDAASEALNASSKEEAMQIIKEKLPEKFLFQYH
FT NLSSNLDKIFTQAPEPWSPPFHLSSFNNVPKEMKDWADDYFGRGAAARPERPISIIVEG
FT DSRTGKTMWARALGSHNYLSGHLDFNSKVFSNHAEYNVIDDIAPHYLKLKHWKELIGAQ
FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGVSYKCFLDKEENAALKNWTIHNAKFIFLN
FT SPLYQSSTQSCEETRNQATSS"
FT CDS complement(2067. .2324)
FT /codon_start=1
FT /product="AC4 protein"
FT /note="AC4"
FT /protein_id="AFD54484.1"
FT /translation="MGNHICMHLFNSKESSSARIADSSTSDIHSHLPSPMPIYRVQNHP
FT LMSSPTSRRTVITSNGVLFKSTEDLLEEVRRQLMMQHPKH"
XX
SQ Sequence 2614 BP; 686 A; 512 C; 594 G; 822 T; 0 other;
jn419003 Length: 2614 20-MAR-2012 Type: N Check: 5424 ..
1 accggatggc cgcccgattt ttggggtaca tctctttttg ggcctcatgg
51 gcctcctttt aatttaaatt aaagtaaagt tattggactg tccaatcaat
101 accgttgtgt cgagcctatt tatttcttcc aacttggccc ccaagtagac
151 taacggctat aaatttaaat taaaactcac aacctcttaa attcaaaatg
201 gttaagcgcg atgccccatg gcgccacatg gcaggaacgg ctaagattag
251 ccggtcgtcc aattattccc cacgtagtgg aaatgggtcg agatacaata
301 aggccgcaga gtgggtcaac aggcccatgt atagaaagcc caggatatat
351 cggactatga gaggccctga tgttcctaga ggttgtgaag gcccatgcaa
401 agtccagtct tttgaacaac gacatgatgt atcacatgtg ggtaaggtga
451 tttgtttatc tgatgttaca cgtgggaatg gtattaccca tcgtgttgga
501 aaacgttttt gcgttaagtc cgtgtatatt ctaggtaaga tatggatgga
551 cgagaatatc aagttgaaga accacaccaa tagtgttatg ttttggttgg
601 tcagagaccg tagaccctat ggtacaccat tggaatttgg ccaagttttt
651 aatatgtttg ataatgagcc cagtactgct acggttaaga acgatcttcg
701 tgatcgtttt caagttatgc ataaatttta tgcgaaggtg actggtggac
751 aatatgctag caatgaacag gcgcttgtta agcgtttttg gaaggtgaat
801 aatcatgtgg tttacaatca tcaagaagca gcgaagtacg agaatcatac
851 ggagaatgcc ctattattgt atatggcatg tactcatgcc tctaatcccg
901 tgtatgctac tctaaaaatt cggatctatt tttatgattc gatctccaat
951 taataaaatt tgaattttat ttcatgattc tcaagtacat aatttacata
1001 tgatttgtct gttgcgaaac gtacagctct gataacattg tttagcgaaa
1051 taacacctat acgatctaaa tacaatgaaa ctaaatattt aaatctattt
1101 aaatatgtcg tcccagaagc ttgaagagat atcgtccaga cttggaaatt
1151 caggaaagcc ttgtgtagac ccagtttgtt cctgaggttg tggttgaacc
1201 gtatttgtat gtggtatatt ctggtcgtgg tgtgaagtgg atcctctacg
1251 ttgtacatct tgaaataaag gggatttgat atctcccaga tatacacgcc
1301 attctctgct tgacgtgcag tgatgcgttc ccctgtgcgt gaatccatgt
1351 cccgagcaat ttatgtgtac gtaaattgtg cagccacact ctaaatcaac
1401 tcgacgtcgc ctgattgcgc gtttcttcgc agctctgtgt tgaactttga
1451 tagagggggg agttgaggaa gatgaatttc gcattatgga tagtccagtt
1501 tttgagagct gcgttttcct ctttgtcgag gaaacactta taactgaccc
1551 cttcacctgg attgcaaagc acgattgatg ggattccacc tttaatttga
1601 acgggtttcc cgtatttgca gtttgattgc cagtcctttt gagccccaat
1651 caattccttc cagtgcttta actttagata gtgcggtgcg atgtcatcaa
1701 tgacgttata ctcagcatga tttgaaaaca cctttgagtt gaaatccagg
1751 tgaccactta gataattgtg ggaccctaat gcacgtgccc acatcgtctt
1801 ccccgtccgt gaatcacctt cgacgatgat actaataggt ctttccggcc
1851 gcgcagcggc acctcttccg aaatagtcat ctgcccagtc tttcatctcc
1901 ttgggcacat tattgaatga ggagaggtga aacggaggag accacggctc
1951 cggagcctgt gtaaatattt tatccagatt gctagagagg ttatgatatt
2001 ggaagagaaa cttttccggt agtttctctt ttattatttg catggcttct
2051 tcttttgaag aagcattcag tgcttcggat gctgcatcat tagctgtctt
2101 ctgacctcct ctagcagatc ttccgtcgac ttgaaaagca ccccattcga
2151 tgtaatcacc gtccttctcg atgtaggact tgacatcaga ggatgatttt
2201 gcactctgta tattggcatg ggagacggaa gatgtgagtg gatgtctgag
2251 gtcgaagaat ctgcaattcg tgcactggaa ctttccttcg aattgaataa
2301 gtgcatgcag atgtggttcc ccattatcgt gcagttcttt gcagattctg
2351 atgtatttct tgttgacggg tgtttctatt tgttgaagtt gttcaagtgc
2401 acactctttt gtaatggagc attgtggata tgtgaggaaa taattcttag
2451 cgcttatctt aaaacgcttc ggtggtggca tacttgtaaa taagtgtgtg
2501 taccccgatt gagctctcgc tcataagtcc ttatgaattg gggtaaaggg
2551 gacaatatat agtataagtt cctaagggct taagggacac gtgtaggcca
2601 tccgttataa tatt