Sequence of DPV Narcissus latent virus
Narcissus latent virus isolate NL1_11 polyprotein gene, partial cds.
ACC No: JN662384
Dated: 2012-07-20 | Length: 1165 | CRC: 61477922
ID JN662384; SV 2; linear; genomic RNA; STD; VRL; 1165 BP.
XX
AC JN662384;
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DT 13-FEB-2012 (Rel. 111, Created)
DT 20-JUL-2012 (Rel. 113, Last updated, Version 2)
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DE Narcissus latent virus isolate NL1_11 polyprotein gene, partial cds.
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KW .
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OS Narcissus latent virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Macluravirus.
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RN [1]
RP 1-1165
RA Sochacki D., Berniak H., Komorowska B.;
RT "Molecular characterization of Polish isolates of Narcissus latent virus";
RL Unpublished.
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RN [2]
RP 1-1165
RA Sochacki D., Berniak H., Komorowska B.;
RT ;
RL Submitted (09-SEP-2011) to the INSDC.
RL Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL 1/3, Skierniewice, Lodzkie 96-100, Poland
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RN [3]
RC Sequence update by submitter
RP 1-1165
RA Sochacki D., Berniak H., Komorowska B.;
RT ;
RL Submitted (18-JUL-2012) to the INSDC.
RL Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL 1/3, Skierniewice, Lodzkie 96-100, Poland
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CC On Jul 18, 2012 this sequence version replaced gi:374921808.
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FH Key Location/Qualifiers
FH
FT source 1. .1165
FT /organism="Narcissus latent virus"
FT /host="Narcissus sp.; cultivar: Hawera"
FT /isolate="NL1_11"
FT /mol_type="genomic RNA"
FT /country="Poland"
FT /collection_date="27-Sep-2010"
FT /db_xref="taxon:48200"
FT CDS <1. .1071
FT /codon_start=1
FT /product="polyprotein"
FT /note="contains NIb-CP"
FT /db_xref="UniProtKB/TrEMBL:H6UM49"
FT /protein_id="AFA26134.2"
FT /translation="DVLLYAQENDLGSVCYMDPCQVFALHYGSSEGLESVDFESDNESA
FT NDADDDVTPSLELQMDVENLIPEKGKNAKNTNKDEQSKRTDATAQGESSSPLKSSTEEA
FT ANRGDTNPPQGDPLVDDEIVEWVIPKMSSNIVTSPVPVVNGKKLWKRGILKNMPKIMFS
FT TTSTMATQVQLTSWVEEVKKSLALKTDDAWTVVITNWCIWCANNGTSSEIDTSQNMEIR
FT DSFGKVQEVPIEIFVNPAVENGGLRKIMRHFSGITYEILKVGKQMTAWGNKRGFTEKSM
FT IPYAFDYYVVTNTTPKTVREQLAQSKAAAIGSGTVRKMILDGNIQGSHASYERHVDTDN
FT SEYEHGSSVDQRPYLT"
FT mat_peptide <1. .177
FT /product="NIb"
FT mat_peptide 178. .1068
FT /product="coat protein"
FT 3'UTR 1072. .>1165
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SQ Sequence 1165 BP; 361 A; 229 C; 281 G; 294 T; 0 other;
jn662384 Length: 1165 20-JUL-2012 Type: N Check: 7892 ..
1 gatgttttgt tgtacgctca agagaacgac ttgggatcag tttgttacat
51 ggacccatgt caggtgttcg cactacacta tgggtcatct gaaggtttgg
101 agagcgtgga cttcgagagt gacaacgaga gtgcaaatga tgctgatgat
151 gacgtcacgc ccagcttgga actccagatg gatgtcgaga atctgattcc
201 tgagaaaggg aaaaacgcta agaacacgaa caaagacgaa caaagcaagc
251 gaactgatgc gactgctcag ggcgagtcaa gtagccctct caagagcagc
301 acagaggagg ccgccaaccg aggtgacaca aatccaccac aaggagatcc
351 tttagttgat gatgagatag tcgaatgggt cattccaaaa atgagttcaa
401 acattgtgac ctcaccagtg ccagttgtca atggcaagaa actgtggaag
451 cgaggaatcc tgaaaaacat gccgaaaata atgttcagca caacttcaac
501 catggcaact caagttcaac taacatcatg ggttgaggaa gttaagaaat
551 cactcgccct caaaacagat gatgcgtgga cggttgtaat cacaaattgg
601 tgcatttggt gcgctaacaa tggcacctca tctgaaattg acacatcaca
651 gaatatggaa attcgtgata gttttggaaa agttcaagaa gtccccattg
701 aaatttttgt taatccagct gttgagaatg gtgggttacg gaaaatcatg
751 aggcattttt ctggcataac atatgaaatt ttgaaggttg gtaagcaaat
801 gacagcctgg gggaacaaga ggggttttac tgagaaatcg atgatcccct
851 acgcttttga ctactatgtc gtcacaaaca caacaccgaa gactgtgcgt
901 gagcaattgg ctcaatcgaa agcagcagca attggctcag gcacggtgag
951 aaagatgatc cttgatggaa acatacaagg gtcacacgct agttatgaac
1001 gacatgtcga cacggacaat agcgaatatg agcatggttc cagtgttgac
1051 cagaggccct atcttactta agttctgcgt tcttgaacgt ttgaacttaa
1101 taatttatat ttgcattata tgagttttct ttgaagctta ttttctctct
1151 tttctctttg agctt