Sequence of DPV Potato virus Y

Potato virus Y isolate Chiang Mai coat protein (CP) gene, complete cds.

ACC No: JN795003

Dated: 2012-02-19 | Length: 798 | CRC: 542575895

                
ID   JN795003; SV 1; linear; genomic RNA; STD; VRL; 798 BP.
XX
AC   JN795003;
XX
DT   19-FEB-2012 (Rel. 111, Created)
DT   19-FEB-2012 (Rel. 111, Last updated, Version 1)
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DE   Potato virus Y isolate Chiang Mai coat protein (CP) gene, complete cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-798
RA   Khapanya W., Hongprayoon R., Chantajorn S.;
RT   "Expression of the coat protein gene of Potato virus Y (PVY) in Escherichia
RT   coli strain DH5 alpha and production of its specific polyclonal antibody";
RL   Unpublished.
XX
RN   [2]
RP   1-798
RA   Khapanya W., Hongprayoon R., Chantajorn S.;
RT   ;
RL   Submitted (28-SEP-2011) to the INSDC.
RL   Department of Plant Pathology, Faculty of Agriculture at Kamphaeng Saen,
RL   Centre for Agricultural Biotechnology, Kasetsart University, Kamphaeng Saen
RL   Campus, Kamphaeng Saen, Nakhon Pathom 73140, Thailand
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .798
FT                   /organism="Potato virus Y"
FT                   /host="Solanum tuberosum L."
FT                   /isolate="Chiang Mai"
FT                   /mol_type="genomic RNA"
FT                   /country="Thailand"
FT                   /collection_date="22-Jan-2011"
FT                   /db_xref="taxon:12216"
FT   gene            1. .798
FT                   /gene="CP"
FT   CDS             1. .798
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AFA43942.1"
FT                   /translation="MGNDTIDAGGSSKKDARPEQGSIQSNPNKGKDKDVNAGTSGTHTV
FT                   PRIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRMAYDI
FT                   GETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMAH
FT                   FSDVAEAYIEMRNKKEPYMPRYGLIRNLRDVGLARYAFDFYEVTSRTPVRAREAHIQMK
FT                   AAALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGV"
XX
SQ   Sequence 798 BP; 263 A; 161 C; 205 G; 169 T; 0 other;

jn795003 Length: 798  19-FEB-2012  Type: N  Check: 8542  ..

       1  atgggaaatg acacaatcga tgcaggagga agcagcaaga aagatgcaag
      51  accagagcaa ggcagcatcc agtcaaaccc gaacaaagga aaagataagg
     101  atgtgaatgc tggtacatct gggacacata ctgtgccgag aatcaaggct
     151  atcacgtcta aaatgagaat gcccaaaagt aagggagcaa ccgtgctaaa
     201  cttagaacac ttgcttgagt atgctccaca acaaattgat atttcaaata
     251  ctcgggcaac tcaatcacag tttgatacgt ggtatgaggc agtgcggatg
     301  gcatacgaca taggagaaac tgagatgcca actgtgatga atgggcttat
     351  ggtttggtgc attgaaaatg gaacctcgcc aaatgtcaac ggagtttggg
     401  ttatgatgga tggggatgaa caagtcgagt acccgttgaa accaatcgtt
     451  gagaatgcaa aaccaaccct taggcaaatc atggcacatt tctcagatgt
     501  tgcagaagcg tatatagaaa tgcgcaacaa aaaggaacca tatatgccac
     551  gatatggttt aattcgaaat ctgcgggatg tgggtttagc gcgttatgcc
     601  tttgactttt acgaggtcac atcacgaaca ccagtgaggg ctagggaagc
     651  gcacattcaa atgaaggccg cagcattgaa atcagcccaa cctcgacttt
     701  tcgggttgga cggtggcatc agtacacaag aggagaacac agagaggcac
     751  accaccgagg atgtctctcc aagtatgcat actctacttg gagtctga