Sequence of DPV Rice tungro bacilliform virus

Rice tungro bacilliform virus isolate Cuttack hypothetical protein gene, complete cds.

ACC No: JN836951

Dated: 2012-07-22 | Length: 339 | CRC: 1907248503

                
ID   JN836951; SV 1; linear; genomic DNA; STD; VRL; 339 BP.
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AC   JN836951;
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DT   22-JUL-2012 (Rel. 113, Created)
DT   22-JUL-2012 (Rel. 113, Last updated, Version 1)
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DE   Rice tungro bacilliform virus isolate Cuttack hypothetical protein gene,
DE   complete cds.
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KW   .
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OS   Rice tungro bacilliform virus
OC   Viruses; Retro-transcribing viruses; Caulimoviridae; Tungrovirus.
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RN   [1]
RP   1-339
RX   PUBMED; 22544477.
RA   Mangrauthia S.K., Malathi P., Agarwal S., Sailaja B., Singh J.,
RA   Ramkumar G., Krishnaveni D., Balachandran S.M.;
RT   "The molecular diversity and evolution of Rice tungro bacilliform virus
RT   from Indian perspective";
RL   Virus Genes 45(1):126-138(2012).
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RN   [2]
RP   1-339
RA   Mangrauthia S.K., Malathi P., Singh J., Neeraja C.N., Krishnaveni D.,
RA   Balachandran S.M.;
RT   "Sequencing of ORF sequences of Rice tungro bacilliform virus isolates";
RL   Unpublished.
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RN   [3]
RP   1-339
RA   Mangrauthia S.K., Malathi P., Singh J., Neeraja C.N., Krishnaveni D.,
RA   Balachandran S.M.;
RT   ;
RL   Submitted (11-OCT-2011) to the INSDC.
RL   Biotechnology Section, Directorate of Rice Research, Rajendranagar,
RL   Hyderabad, AP 500030, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .339
FT                   /organism="Rice tungro bacilliform virus"
FT                   /host="rice"
FT                   /isolate="Cuttack"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /collected_by="S.K. Mangrauthia"
FT                   /collection_date="Oct-2010"
FT                   /db_xref="taxon:10654"
FT   CDS             1. .339
FT                   /codon_start=1
FT                   /product="hypothetical protein"
FT                   /note="ORF-II"
FT                   /protein_id="AFB74321.1"
FT                   /translation="MSADYPTFKEALEKFKEDLESETANKDKFGWVFTLQGMKTTADVN
FT                   LASKGLVQLYALQEIDKKINNLSAQVGKIPTTSGSSSSAGAIVPAGSNTQGQYKAPPKK
FT                   GIKRKYPG"
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SQ   Sequence 339 BP; 131 A; 54 C; 71 G; 83 T; 0 other;

jn836951 Length: 339  22-JUL-2012  Type: N  Check: 6907  ..

       1  atgagtgctg attatcctac ctttaaggaa gccttagaaa aatttaagga
      51  agatttagag tctgaaacag caaacaagga taagtttggt tgggttttta
     101  ctcttcaagg aatgaaaacc acagcagacg taaatctagc atctaaagga
     151  ctagtacaac tttacgcttt acaagaaatt gataagaaaa taaataattt
     201  atctgcacaa gttggcaaga tacctacaac tagtggtagt agtagttcag
     251  caggagccat agtacctgca ggaagtaata cccaaggtca gtataaagca
     301  ccacctaaga agggaattaa aaggaagtat ccaggatga