Sequence of DPV Bean chlorotic mosaic virus
Bean chlorotic mosaic virus isolate Venezuela:Rubio 932:2007 segment DNA-A, complete sequence.
ACC No: JN848772
Dated: 2013-03-17 | Length: 2597 | CRC: 91046024
ID JN848772; SV 1; circular; genomic DNA; STD; VRL; 2597 BP.
XX
AC JN848772;
XX
DT 30-NOV-2012 (Rel. 115, Created)
DT 17-MAR-2013 (Rel. 116, Last updated, Version 2)
XX
DE Bean chlorotic mosaic virus isolate Venezuela:Rubio 932:2007 segment DNA-A,
DE complete sequence.
XX
KW .
XX
OS Bean chlorotic mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2597
RX PUBMED; 23178970.
RA Fiallo-Olive E., Marquez-Martin B., Hassan I., Chirinos D.T.,
RA Geraud-Pouey F., Navas-Castillo J., Moriones E.;
RT "Complete genome sequences of two novel begomoviruses infecting common bean
RT in Venezuela";
RL Arch. Virol. 158(3):723-727(2013).
XX
RN [2]
RP 1-2597
RA Marquez-Martin B., Fiallo-Olive E., Chirinos D., Geraud-Pouey F.,
RA Navas-Castillo J., Moriones E.;
RT ;
RL Submitted (12-OCT-2011) to the INSDC.
RL Fruticultura Subtropical y Fitopatologia, Instituto de Hortofruticultura
RL Subtropical y Mediterranea 'La Mayora', Estacion Experimental La Mayora,
RL Algarrobo-Costa, Malaga 29750, Spain
XX
FH Key Location/Qualifiers
FH
FT source 1. .2597
FT /organism="Bean chlorotic mosaic virus"
FT /segment="DNA-A"
FT /host="Phaseolus vulgaris"
FT /isolate="Venezuela:Rubio 932:2007"
FT /mol_type="genomic DNA"
FT /country="Venezuela"
FT /collection_date="Jul-2007"
FT /db_xref="taxon:1227355"
FT gene 181. .939
FT /gene="AV1"
FT CDS 181. .936
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:K7PRX3"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:K7PRX3"
FT /protein_id="AFQ93626.1"
FT /translation="MPKRDLPWRAMPGTSKVSRNANYSPRAGGGSKLSRASEWVNRPMY
FT MKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT KNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSIMN"
FT gene complement(933. .1331)
FT /gene="AC3"
FT CDS complement(933. .1331)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancement protein"
FT /db_xref="GOA:K7PRU3"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:K7PRU3"
FT /protein_id="AFQ93627.1"
FT /translation="MDSRTGELITAPQAENGVYIWEIENPLYFKLYKVEDPLFTNTRIY
FT SVQIRFNHNLRKALDLHKAYLNFQVWTISLTASGSTYLNRFKRLVHMYLDRLGVISINN
FT VIRAVRFATDRSYVNYVVEDHSIKFKIY"
FT gene complement(1078. .1467)
FT /gene="AC2"
FT CDS complement(1078. .1467)
FT /codon_start=1
FT /gene="AC2"
FT /product="transactivator protein"
FT /db_xref="GOA:K7PRY8"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:K7PRY8"
FT /protein_id="AFQ93628.1"
FT /translation="MRSSSPSTPPSIKKKHREAKKRSVRRRRIDLECGCSIYFHIGCTG
FT HGFTHRGTHHCTSGGEWRVYLGDRKSPLFQTIQGRGPTLHEHQDIQRANTVQPQPQESI
FT GSPQSLPELPSLDDIPDSFWVDLFE"
FT gene complement(1379. .2464)
FT /gene="AC1"
FT CDS complement(1379. .2464)
FT /codon_start=1
FT /gene="AC1"
FT /product="replication associated protein"
FT /db_xref="GOA:K7PRV5"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:K7PRV5"
FT /protein_id="AFQ93629.1"
FT /translation="MPPPKKFRVQSKNYFLTYPQCSLTKEEALSQIQNLATPVNKKFIK
FT ICREFHEDGQPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTVEWGQFQIDGRSARGGQQSANDTYAKALNAGSAEAALQIIKEEQPQHFFLQHH
FT NLVANATRIFQKPPEPWTPPFPLSSFTNVPDEMQEWADDYFGKSPAARPERPLSLIVEG
FT DSRTGKTMWARSLGPHNYLSGHLDFNSRVYSDEVEYNVIDDVAPHYLKLKHWKELFWAQ
FT KKWQSNCKYGKPVVIKGGIPSIVLCNPGEGASYKDFLNKEENTGIRNWTLKNAVFITLD
FT SPLYQEETQGGQEEVSQTTPH"
FT gene complement(2050. .2307)
FT /gene="AC4"
FT CDS complement(2050. .2307)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:K7PRX6"
FT /protein_id="AFQ93630.1"
FT /translation="MGNLIYMCSSSSKENTSARITDSSIWSPQPGQHISIRTYRELNQA
FT PTSSPTSTRTEIQLNGDSSRSTADLLEEVSNLLTTHMLKR"
XX
SQ Sequence 2597 BP; 636 A; 555 C; 629 G; 777 T; 0 other;
jn848772 Length: 2597 17-MAR-2013 Type: N Check: 8268 ..
1 accggatggc cgcgcgattt tttctgcccc tccgctttaa ttcgaattaa
51 agcgtgctgc tttcgtttcg tccaatgata ttgcgtctga cgagcttaga
101 tatttgcaac aacttgggcg ctaagttgtt gggtcaagat tataaattaa
151 agcagcacgg cccactgcct ttaactcaaa atgcctaagc gcgatctccc
201 atggcgcgca atgcctggaa catcaaaggt tagtcgcaat gctaactact
251 ctccacgtgc aggtggtggc tcgaaattga gtagggcctc tgagtgggtt
301 aacaggccca tgtatatgaa gcccaggatt tatcggacgc tgaggactcc
351 agatgtgccc agaggctgtg aaggtccttg taaggtccag tcatatgaac
401 agcgtcacga tatttcacat gtcgggaagg tcatgtgtat ctctgatgtc
451 acacgtggca atggcatcac ccaccgtgtg ggtaagcgtt tctgtgttaa
501 gtctgtgtat atccttggta agatctggat ggatgagaat atcaagctga
551 agaaccacac caacagcgtt atgttctggc tggtcaggga ccgtagaccg
601 tatggaacgc ccatggattt cggtcaggta ttcaacatgt tcgacaacga
651 gcccagcact gccacggtca agaacgatct ccgtgatcgt tatcaagtta
701 tgcacaagtt ctatggtaag gtgacaggtg gacagtatgc aagtaacgag
751 caggcaatcg tcaagcgttt ctggaaggtc aacaatcatg tggtctacaa
801 tcatcaagag gctggcaagt atgagaatca cactgagaac gctttgttat
851 tgtatatggc atgtactcat gcctctaatc ctgtttatgc aacgcttaag
901 attcgaatct atttttatga ttcgattatg aattaataaa ttttgaattt
951 tattgaatga tcttccacga cataatttac atacgatctg tctgttgcga
1001 aacgaacagc cctaattacg ttgttaatgg aaataacacc caatcgatct
1051 aagtacatat gaactaaacg cttaaatcta ttcaaataag tcgacccaga
1101 agctgtcagg gatatcgtcc agacttggaa gttcaggtag gctttgtgga
1151 gatccaatgc tttcctgagg ttgtggttga accgtatttg cacgctgtat
1201 atcctggtgt tcgtgaagag tgggtcctct accttgtata gtttgaaata
1251 aaggggattt tctatctccc agatatacac gccattctcc gcctgaggtg
1301 cagtgatgag ttcccctgtg cgtgaatcca tgtcctgtgc agcctatgtg
1351 gaagtatatg gagcaaccgc actccagatc aatgcggcgt cgtctgactg
1401 acctcttctt ggcctccctg tgtttcttct tgatagaggg gggagtcgag
1451 ggtgatgaag accgcattct tcagggtcca gttcctgatg cctgtgtttt
1501 cctctttgtt gaggaaatct ttataactgg caccctcacc aggattgcaa
1551 agcacgattg atgggatccc tcctttaatg acaactggct tgccgtactt
1601 gcaatttgac tgccatttct tttgggccca aaaaagttct ttccagtgct
1651 ttagctttag atagtgcggt gcgacatcat caatgacgtt atactccact
1701 tcgtccgagt acactctgga attgaagtct aggtgtccac taagataatt
1751 atgtgggcct aatgatcgag cccacatcgt ctttcctgtt cttgaatcac
1801 cttcgactat gagacttaat ggtctttctg gccgcgcagc gggactcttt
1851 ccaaaataat catctgccca ttcttgcatc tcgtcgggaa cgttagtgaa
1901 agaggagagt ggaaacggag gagtccatgg ctccggaggc ttttggaata
1951 ttctggttgc gttagcaacc aggttgtgat gttgaaggaa gaaatgttgc
2001 ggttgttctt cctttattat ttgcagagct gcctctgctg atcctgcatt
2051 taacgcttta gcatatgtgt cgttagcaga ttgctgacct cctctagcag
2101 atctgccgtc gatctggaac tgtccccatt caactgtatc tccgtccttg
2151 tcgatgtagg acttgacgtc ggagcttgat ttagctccct gtatgttcgg
2201 atggaaatgt gctgacctgg ttggggagac cagatcgaag aatctgttat
2251 tcgtgcactg gtattttcct tcgaactgga tgagcacatg tagatgaggt
2301 tgcccatctt cgtgaaattc tctgcagatc ttgatgaatt tcttgttaac
2351 aggagttgct aggttttgta tttgggaaag tgcctcttct ttggtaagag
2401 agcactgggg ataagtgagg aaatagttct tggattgaac tctaaatttc
2451 ttaggcggtg gcattttagt aataagaagg ggtactccag ttgagctccc
2501 tcaaaacttg ctcatgcaat tggagtattg gagtactata tatactataa
2551 ctctcaatct cggttttgga acacgtggcg gccatccgta taatatt