Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein India virus isolate OY163 segment DNA-A, complete sequence.
ACC No: JQ326266
Dated: 2012-10-10 | Length: 2744 | CRC: 1768126791
ID JQ326266; SV 1; circular; genomic DNA; STD; VRL; 2744 BP.
XX
AC JQ326266;
XX
DT 10-OCT-2012 (Rel. 114, Created)
DT 10-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE Bhendi yellow vein India virus isolate OY163 segment DNA-A, complete
DE sequence.
XX
KW .
XX
OS Bhendi yellow vein India virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2744
RA Venkataravanappa V., Lakshiminarayanareddy C., Jalali S., Krishnareddy M.;
RT "Molecular genetic diversity of Begomoviruses infecting okra in India";
RL Unpublished.
XX
RN [2]
RP 1-2744
RA Venkataravanappa V., Lakshiminarayanareddy C., Jalali S., Krishnareddy M.;
RT ;
RL Submitted (28-DEC-2011) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake Po, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2744
FT /organism="Bhendi yellow vein India virus"
FT /segment="DNA-A"
FT /lab_host="okra"
FT /isolate="OY163"
FT /mol_type="genomic DNA"
FT /country="India:Aurangabad, Maharashtra"
FT /collected_by="M. Krishnareddy"
FT /collection_date="2006"
FT /db_xref="taxon:908023"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="pre-coat protein"
FT /protein_id="AFU61944.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQEYSPDTLGYDLIRDL
FT ICIVRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ
FT ETQNVPDVQKSGCSKGM"
FT gene 281. .1051
FT /gene="AV1"
FT CDS 281. .1051
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AFU61945.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP
FT STATVKNMHRDRYQVLRKWHATVTGGQYAIKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(629. .985)
FT /gene="AC5"
FT CDS complement(629. .985)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5 protein"
FT /protein_id="AFU61946.1"
FT /translation="MGTSHVKHQCILGVILVFSCLLLVVNNVIVDPNKFLNQRLFLNRI
FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYFTKILWFICRSSITNKEKHHRIR
FT MVLGLDVLVHPYLT"
FT gene complement(1054. .1458)
FT /gene="AC3"
FT CDS complement(1054. .1458)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="AFU61947.1"
FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI
FT ITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVVSINL
FT VIKAVEHVLYNVINQTMYVDQYSDIKFNLY"
FT gene complement(1151. .1603)
FT /gene="AC2"
FT CDS complement(1151. .1603)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /protein_id="AFU61948.1"
FT /translation="MQHSSFSPNRCTRVPIKVQHREAKRRIRRRRVDLECGCSYYLSIN
FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLQP
FT TESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCSLN"
FT gene complement(1500. .2591)
FT /gene="AC1"
FT CDS complement(1500. .2591)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /protein_id="AFU61949.1"
FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQFLNLQTPVNKKFIR
FT ICRELHEDGNPHLHVLIQFEGKFQCRNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKTYM
FT EKDGDILDHGVFKVDGRSARGGCQTANDAYAEAINAGSKAQALNILKEKAPRDFLLQFH
FT NLNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFREFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNDSYKEFLDEEKNSALIAWALKNAAFVFLTEPL
FT YSGTNQSTAQGSEETHQEEESRS"
FT gene complement(2141. .2434)
FT /gene="AC4"
FT CDS complement(2141. .2434)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="AFU61950.1"
FT /translation="MGILTCMFSSSSKESSSAETIDSSTSPPQLGQHISIRTFRELKAQ
FT AMSKPTWRKTETSLIMEFSKSMEDQLEEVAKLPTTHMPRQSTQGPKLRPSIY"
XX
SQ Sequence 2744 BP; 730 A; 535 C; 650 G; 829 T; 0 other;
jq326266 Length: 2744 10-OCT-2012 Type: N Check: 8080 ..
1 accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgacg
51 atgcagactc aaagcttaga taacgctcct tcgactataa gtacgtgcgc
101 actaagtttc aattcaaaaa atgtgggatc cactattaaa cgagttcccg
151 gatacggttc acggttttcg ttgtatgctt tctgtgaaat atttgcaact
201 tttgtcgcag gagtattcac cagatacgct tggttacgat ttaatacggg
251 atttaatttg tattgtccgt tctcgtaatt atgtcgaagc gagctgcaga
301 tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaacttcg
351 gcagcccata caccagccgt gctgctgccc ccattgtccg cgtcacaaaa
401 caacaggcat ggacaaacag gcctatgaac aggaaaccca gaatgtaccg
451 gatgtacaga agtccggatg ttccaagggg atgtgagggt ccctgtaagg
501 tacagtcgtt tgaatctcga cacgatgtcg ttcatattgg taaggtaatg
551 tgtatttcgg atgttacgcg tggagtcggt ttgacccatc gtataggtaa
601 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg
651 agaacatcaa gaccaagaac catacgaatt cggtgatgtt tttccttgtt
701 cgtgatcgac gaccgacaga taaaccacaa gattttggtg aagtatttaa
751 tatgtttgat aacgagccca gtacggcgac cgtgaagaac atgcataggg
801 atcggtacca ggtgttgagg aaatggcatg caaccgttac tggtggacaa
851 tatgcgatta aggaacaggc gttggttaag aaatttgtta gggtcaacaa
901 ttacgttgtt tacaaccagc aggaggcagg aaaatacgag aatcacaccg
951 agaatgcatt gatgctttac atggcttgta cccatgctag caacccagtt
1001 tatgctactc ttaagattag gatatatttt tatgactctg taacgaattg
1051 aaattaataa agattgaatt ttatatctga atattggtct acatacattg
1101 tttgattaat tacattgtac aatacatgtt caacggcttt aataactaaa
1151 ttaattgaga ctacacctag attgttgaga tatttgagga cttgggtttt
1201 gaataccctt aagaaaagac cagtctgagg gtgtaaggtc gtccagattc
1251 ggaaggttag aaaacacttg tgtattccca gagctttccg taggttgtag
1301 ttgaaatgga tcctgagtgt tattatgtcc atgttcgtcg tgaatggacg
1351 gttgtcgtgg ttgaggatct tgaaatagag gggatttgga accttccaga
1401 tatagacgcc attctttgct tgagctgcag tgatgcgtgc ccctgtgcga
1451 gaatccatgg ttgtggcagt tgatagagag ataataagaa cacccgcatt
1501 caagatctac tctcctcctc ctgatgcgtc tcttcgcttc cctgtgctgt
1551 actttgattg gtacccgagt acaacggttc ggtgagaaag acgaatgctg
1601 cattttttaa agcccacgct atcaaagctg agttcttttc ctcgtccaag
1651 aattctttat agctgtcgtt ggggcctgga ttgcagagga agattgttgg
1701 aatgccgcct ttaatttgaa ctggcttccc gtactttgtg tttgattgcc
1751 agtccctttg ggcccccatg aattctctaa agtgtttcag gaagtgtgga
1801 tcgacatcat caatgacgtt ataccaagcg tcgttactgt acacctttgg
1851 gctaaggtcc agatgcccgc ataaatagtt atgtgggcct aaagacctag
1901 cccacattgt ttttccagta cgactatctc cctctatgac tatactttga
1951 ggtctcagag gccgcgcagc ggcatcgaca acgttctcgc acgcccactc
2001 ttcaagttct tctggaactt gatcaaatga agaagaagaa aaaggagaaa
2051 cataaggagc tggaggctcc tgaaaatatc tatctaaatt agaatttaaa
2101 ttatgaaatt gaagtagaaa gtctcttggg gctttctcct tcagtatatt
2151 gagggcctga gctttggacc ctgcgttgat tgcctcggca tatgcgtcgt
2201 tggcagtttg gcaacctcct ctagctgatc ttccatcgac tttgaaaact
2251 ccatgatcaa ggatgtctcc gtctttctcc atgtaggttt tgacatcgct
2301 tgagctttta gctccctgaa tgttcggatg gaaatgtgct gacctagttg
2351 gggaggtgag gtcgaagaat ctattgtttc tgcactggaa ctttccttcg
2401 aactggatga gaacatgcaa gtgaggattc ccatcttcat gaagttctct
2451 gcagattcta atgaattttt tgtttactgg ggtttggaga tttaagaatt
2501 gggaaagtgc ttcttcttta gtcagggagc acttgggata agtgagaaaa
2551 taatttttgg catttatttt aaaccgattg ggtgctgcca tgttgactta
2601 gtcaatcggt gtctctcaac tctctctatg tatcggtgta ttggagtcct
2651 atatatatgg agactctaat ggcataaatg taaataaaag aactttaatt
2701 tgaaattcaa aggaaaaggc taaagcggcc atccgtctaa tatt