Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein mosaic virus isolate OY118 segment DNA-A, complete sequence.
ACC No: JQ359504
Dated: 2012-10-01 | Length: 2739 | CRC: -182355564
ID JQ359504; SV 1; circular; genomic DNA; STD; VRL; 2739 BP.
XX
AC JQ359504;
XX
DT 01-OCT-2012 (Rel. 114, Created)
DT 01-OCT-2012 (Rel. 114, Last updated, Version 1)
XX
DE Bhendi yellow vein mosaic virus isolate OY118 segment DNA-A, complete
DE sequence.
XX
KW .
XX
OS Bhendi yellow vein mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2739
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Jalali S.,
RA Krishnareddy M.;
RT "Molecular genetic diversity of Bhendi yellow vein mosaic virus";
RL Unpublished.
XX
RN [2]
RP 1-2739
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Jalali S.,
RA Krishnareddy M.;
RT ;
RL Submitted (31-DEC-2011) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2739
FT /organism="Bhendi yellow vein mosaic virus"
FT /segment="DNA-A"
FT /host="okra"
FT /isolate="OY118"
FT /mol_type="genomic DNA"
FT /country="India:Vayalur, Tamail Nadu"
FT /collected_by="M.Krishnareddy"
FT /collection_date="2006"
FT /db_xref="taxon:120168"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="pre-coat protein"
FT /protein_id="AFS63526.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL
FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPLHQPCCCPHCPRHKTTGMDKQAYEQ
FT ETQNVPDVQKSGCSKGM"
FT gene 281. .1051
FT /gene="AV1"
FT CDS 281. .1051
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AFS63527.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP
FT STATVKNMHRDRYQVLRKWHATVTGGQYAIKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(629. .985)
FT /gene="AC5"
FT CDS complement(629. .985)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5"
FT /protein_id="AFS63528.1"
FT /translation="MSTSHVKHQRILGVILVFSCFLLVVNNVIVNPNKFLNQRLFLNRI
FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYFTKILWFICRSSITNKEKHHRIR
FT MVLGLDVLVHPYLT"
FT gene complement(1054. .1458)
FT /gene="AC3"
FT CDS complement(1054. .1458)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="AFS63529.1"
FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI
FT ITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISINL
FT VIKAVEHVLYNVINQTMYVDQYSDIKFNLY"
FT gene complement(1151. .1603)
FT /gene="AC2"
FT CDS complement(1151. .1603)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /protein_id="AFS63530.1"
FT /translation="MQHSSFSPNRCTRVPIKVQHREAKRRIRRRRVDLECGCSYYLSIN
FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPKPRQPSIHDEHGHNNTQDPFQLQP
FT TESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCNLN"
FT gene complement(1500. .2591)
FT /gene="AC1"
FT CDS complement(1500. .2591)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /protein_id="AFS63531.1"
FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLQNLQTPTNKKFIK
FT ICRELHEDGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIRELAPKDYVLQFH
FT NLNANLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMDAAARPLRPLSLVLEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNIIDDVDPHFLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEPL
FT YSGTNQSTAQGSEETHQEEESRS"
FT gene complement(2132. .2434)
FT /gene="AC4"
FT CDS complement(2132. .2434)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4"
FT /protein_id="AFS63532.1"
FT /translation="MGNLICTCSSSSRANTSARISDSSTWSPQAGQHISIRTFRELNQA
FT PMSSPTSTRTETPSNGESFRSMDDLQEGDSRQPTTLTPQHLTQAVSQRLLESLGS"
XX
SQ Sequence 2739 BP; 728 A; 542 C; 650 G; 819 T; 0 other;
jq359504 Length: 2739 01-OCT-2012 Type: N Check: 6359 ..
1 accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgacg
51 atgcagactc aaagcttaga taacgctcct tcggctataa gtacgtgcgc
101 aataagtttc aattcaaaaa atgtgggatc cactattaaa tgaatttccg
151 gatacggttc acgggtttcg ttgtatgcta tctgtaaaat atttgcaact
201 tttgtcgcag gattattctc cagatacact tgggtacgag ttaatacggg
251 atttaatttg tattttacgc tcccgtaatt atgtcgaagc gagctgcaga
301 tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaacttcg
351 gcagccctta caccagccgt gctgctgccc ccattgtccg cgtcacaaaa
401 caacaggcat ggacaaacag gcctatgaac aggaaaccca gaatgtaccg
451 gatgtacaga agtccggatg ttccaagggg atgtgagggt ccctgtaagg
501 tacagtcgtt tgaatctcga cacgatgttg tccatattgg taaggtaatg
551 tgtatttctg atgttacgcg tggagtcggt ttgacccatc gtataggtaa
601 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg
651 agaacatcaa gaccaagaac catacgaatt cggtgatgtt tttccttgtt
701 cgtgatcgac gaccgacaga taaaccacaa gattttggtg aagtatttaa
751 tatgtttgat aacgagccca gtacggcgac cgtgaagaac atgcataggg
801 atcggtacca ggtgttgagg aaatggcatg caaccgttac tggtggacaa
851 tatgcgatta aggaacaggc gttggttaag aaatttgtta gggttaacaa
901 ttacgttgtt tacaaccagc aggaagcagg aaaatacgag aatcacaccg
951 agaatgcgtt gatgctttac atggcttgta ctcatgctag caacccagtt
1001 tatgctacgc tgaagattag gatatatttt tatgactctg taacgaattg
1051 atatcaataa agattgaatt ttatatctga atattggtct acatacattg
1101 tttgattaat tacattgtac aatacatgtt caacggcttt aataactaaa
1151 ttaattgaga ttacacctag attgttgaga tatttgagga cttgggtttt
1201 gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagattc
1251 ggaaggttag aaaacacttg tgtattccca gagctttccg taggttgtag
1301 ttgaaatgga tcctgagtgt tattatgtcc atgttcgtcg tgaatggacg
1351 gttgtcgtgg tttaggatct tgaaatagag gggatttgga accttccaga
1401 tatagacgcc attctttgct tgagctgcag tgatgcgtgc ccctgtgcga
1451 gaatccatgg ttgtggcagt tgatagagag ataataagaa cacccgcatt
1501 caagatctac tctcctcctc ctgatgcgtc tcttcgcttc cctgtgctgt
1551 actttgattg gtacccgagt acaacggttc ggtgagaaag acgaatgctg
1601 cattttttaa agcccacgct ttcaaagctg agttcttttc ctcgtccaag
1651 aattctttat agcttgcgtt ggggcctgga ttgcagagga agattgttgg
1701 aatgccgcct ttaatttgaa ctggcttccc gtactttgtg tttgattgcc
1751 agtccctttg ggcccccatg aattctttaa agtgtttgag gaaatgcggg
1801 tcaacatcat ctataatgtt gaaccacgca tcgtttgaat acactttagg
1851 gcttagatct aggtgaccac acaaatagtt atgtgggcct aatgacctag
1901 cccacatagt tttgcccgta cgactatctc cctctaagac taaactcaaa
1951 ggtctcagag gccgcgcagc ggcgtccatg acgttttccg atacccattc
2001 ctcaagttct tctggaactt gatcgaaaga agaagataaa aaaggagaaa
2051 cataaacctc caagggaggt gtaaaaatcc tatctaaatt ggcatttaaa
2101 ttatgaaatt gtaagacata atccttaggt gctaactccc taatgactct
2151 aagagcctct gacttactgc ctgcgttaag tgctgcggcg taagcgtcgt
2201 tggctgtctg ctgtccccct cttgcagatc gtccatcgat ctgaaactct
2251 ccccattcga gggtgtctcc gtccttgtcg atgtaggact tgacatcgga
2301 gcttgattta gctccctgaa tgttcggatg gaaatgtgct gacctgcttg
2351 gggagaccag gtcgaagaat cgctgattct ggcacttgta tttgccctcg
2401 aactggatga gcacgtgcag atgaggttcc ccatcctcgt gaagctctct
2451 gcagatcttg atgaattttt tatttgttgg ggtttgtagg ttttggagtt
2501 gggaaagtgc ttcctcttta gtaagagagc atttgggata agtgagaaaa
2551 taatttttgg catttatttt aaaccgattg ggtgctgcca tgttgactta
2601 gtcaatcggt gtctctcaac tctctctctg gtgtattgga gtcctatata
2651 tatggagact ctaatggcat aaatgtaaat aaaagaactt taatttgaaa
2701 ttcaaaggaa aaggctaaag cggccatccg tctaatatt