Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein mosaic virus isolate 126B segment DNA-A, complete sequence.
ACC No: JQ359505
Dated: 2012-10-01 | Length: 2742 | CRC: 1314096335
ID JQ359505; SV 1; circular; genomic DNA; STD; VRL; 2742 BP.
XX
AC JQ359505;
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DT 01-OCT-2012 (Rel. 114, Created)
DT 01-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE Bhendi yellow vein mosaic virus isolate 126B segment DNA-A, complete
DE sequence.
XX
KW .
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OS Bhendi yellow vein mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2742
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Jalali S.,
RA Krishnareddy M.;
RT "Molecular genetic diversity of Bhendi yellow vein mosaic virus";
RL Unpublished.
XX
RN [2]
RP 1-2742
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Jalali S.,
RA Krishnareddy M.;
RT ;
RL Submitted (31-DEC-2011) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
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FH Key Location/Qualifiers
FH
FT source 1. .2742
FT /organism="Bhendi yellow vein mosaic virus"
FT /segment="DNA-A"
FT /host="okra"
FT /isolate="126B"
FT /mol_type="genomic DNA"
FT /country="India:Jalaon, Maharasthra"
FT /collected_by="M.Krishnareddy"
FT /collection_date="2006"
FT /db_xref="taxon:120168"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="pre-coat protein"
FT /protein_id="AFS63533.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL
FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ
FT ETQNVPDVQKSGCSKGM"
FT gene 281. .1051
FT /gene="AV1"
FT CDS 281. .1051
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AFS63534.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP
FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(629. .985)
FT /gene="AC5"
FT CDS complement(629. .985)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5"
FT /protein_id="AFS63535.1"
FT /translation="MGTSHIKHQRILRMILIFSCLLLVVNNIIVNPNKFLNQRLFLTRI
FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYFTKILWFICRSSITNKEKHHRIR
FT MVLGLDVLVHPYLT"
FT gene complement(1054. .1458)
FT /gene="AC3"
FT CDS complement(1054. .1458)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="AFS63536.1"
FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI
FT ITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVVSINL
FT VIKAVEHVLYNVINQTMYVDQYSDIKFNLY"
FT gene complement(1151. .1603)
FT /gene="AC2"
FT CDS complement(1151. .1603)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /protein_id="AFS63537.1"
FT /translation="MQHSSFSPNRCTRVPIKVQHREAKRRIRRRRVDLECGCSYYLSIN
FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPKPRQPSIHDEHGHNNTQDPFQLQP
FT TESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCSFN"
FT gene complement(1500. .2591)
FT /gene="AC1"
FT CDS complement(1500. .2591)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /protein_id="AFS63538.1"
FT /translation="MAAPNRFQINSKNYFLTYPQCSLNKEEALSQLQNIQTPTNKKYIK
FT ICRELHENGEPHLHVLIQFEGKYKCQNQRLFDLVATNRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAEALNAGSKSEALRVLRELAPKDYVLQFH
FT NLNANLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMDAAARPLRPLSLVLEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNIIDDVDPHFLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEPL
FT YSGTNQSTAQGSEETHQEEESRS"
FT gene complement(2132. .2434)
FT /gene="AC4"
FT CDS complement(2132. .2434)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4"
FT /protein_id="AFS63539.1"
FT /translation="MGNLIFTCSSSSKENTSARIRDYSTWSPQTGQHISIQTFRELNQA
FT PMSSPTSTRTETPSNGESFRSMDDLQEGDSRQPTTLTPRHLTQAVSQRLLEYLGS"
XX
SQ Sequence 2742 BP; 725 A; 548 C; 641 G; 828 T; 0 other;
jq359505 Length: 2742 01-OCT-2012 Type: N Check: 1228 ..
1 accggatggc cgcgcgattt tttaaagtgg tgggtccaga acgcacgacg
51 atgcagactc acagcttaga tcacgctcct tcgactataa gtacgtgcgc
101 actaagtttc aattcaaaaa atgtgggatc cactgttaaa cgagttcccg
151 gatacggttc acgggtttcg ttgtatgcta tctgtaaaat atttgcaact
201 tttgtcgcag gattattctc cagatacgct tgggtacgag ttaatacggg
251 atttaatttg tattttacgc tcccgtaatt atgtcgaagc gagctgccga
301 tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaacttcg
351 gcagcccata caccagccgt gctgctgccc ccattgtccg cgtcacaaaa
401 caacaggcat ggacaaacag gcctatgaac aggaaaccca gaatgtaccg
451 gatgtacaga agtccggatg ttccaagggg atgtgagggt ccctgtaagg
501 tacagtcgtt tgaatctcga cacgatatcg ttcatattgg taaggtaatg
551 tgtatttcgg atgttacgcg tggagtcggt ttgacccatc gtataggtaa
601 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg
651 agaacatcaa gaccaagaac catacgaatt cggtgatgtt tttccttgtt
701 cgtgatcgac gaccgacaga taaaccacaa gattttggtg aagtatttaa
751 tatgtttgat aacgagccca gtacggcgac cgtgaagaac atgcataggg
801 atcggtacca ggtgttgagg aaatggcatg caaccgttac tggtggacaa
851 tatgcgagta aggaacaggc gttggttaag aaatttgtta gggttaacaa
901 ttatgttgtt tacaaccagc aggaggcagg aaaatatgag aatcatacgg
951 agaatgcgtt gatgctttat atggcttgta cccatgctag caacccagtt
1001 tatgctacgc tgaagattag gatatatttt tatgactctg taacgaattg
1051 aaattaataa agattgaatt ttatatctga atattggtct acatacattg
1101 tttgattaat tacattgtac aaaacatgtt cgacagcttt aataactaaa
1151 ttaattgaaa ctacaccgag attgttgaga tatttgagga cttgggtttt
1201 gaataccctt aagaaaagac cagtctgagg gtgtaaggtc gtccagattc
1251 ggaaggttag aaaacacttg tgtattccca gagctttccg taggttgtag
1301 ttgaaatgga tcctgagtgt tattatgtcc atgttcgtcg tgaatggacg
1351 gttgtcgtgg tttaggatct tgaaatagag gggatttgga accttccaga
1401 tatagacgcc attctttgct tgagctgcag tgatgcgtgc ccctgtgcga
1451 gaatccatgg ttgtggcagt tgatagagag ataataagaa cacccgcatt
1501 caagatctac tctcctcctc ctgatgcgtc tcttcgcttc cctgtgctgt
1551 actttgattg gtacccgagt acaacggttc ggtgagaaag acgaatgctg
1601 cattttttaa agcccacgct ttcaaagctg agttcttttc ctcgtccaag
1651 aattctttat agcttgcgtt ggggcctgga ttgcagagga agattgttgg
1701 aatgccgcct ttaatttgaa ctggcttccc gtactttgtg tttgattgcc
1751 agtccctttg ggcccccatg aattctttaa agtgtttgag gaaatgcggg
1801 tcaacatcat ctataatgtt gaaccacgca tcgtttgaat acactttagg
1851 gcttagatct aggtgaccac acaaatagtt atgtgggcct aatgacctag
1901 cccacatagt tttgcccgta cgactatctc cctctaagac taaactcaaa
1951 ggtctcagag gccgcgcagc ggcgtccatg acgttttccg atacccattc
2001 ctcaagttct tctggaactt gatcgaaaga agaagataaa aaaggagaaa
2051 cataaacctc caagggaggt gtaaaaatcc tatctaaatt ggcatttaaa
2101 ttatgaaatt gtaagacata atccttaggt gctaactccc taagtactct
2151 aagagcctct gacttactgc ctgcgttaag tgcctcggcg taagcgtcgt
2201 tggctgtctg ctgtccccct cttgcagatc gtccatcgat ctgaaactct
2251 ccccattcga gggtgtctcc gtccttgtcg atgtaggact tgacatcgga
2301 gcttgattta gctccctgaa tgtttggatg gaaatgtgct gacctgtttg
2351 tggcgaccaa gtcgaataat ctctgattct ggcacttgta ttttccttcg
2401 aactggatga gcacgtgaag atgaggttcc ccattttcat gaagctctct
2451 gcagatcttt atgtattttt tatttgttgg ggtttgtata ttttgtagtt
2501 gggataatgc ctcttcttta ttaagagagc attgtggata agtgaggaaa
2551 taatttttgg aatttatttg aaaccgattg ggtgctgcca tgactatgtt
2601 tgagcacccg attgactcgc tcttacaact ctctctggta tatcgggtcc
2651 ctatatatag tgagactcaa atggcatatg tgtaattttg taatgaaatt
2701 caaaatcctc acgctccaaa aagcggccat ccgtataata tt