Sequence of DPV Lily mottle virus

Lily mottle virus isolate LMoV-HN coat protein gene, partial cds.

ACC No: JQ361093

Dated: 2012-04-25 | Length: 822 | CRC: 450510422

                
ID   JQ361093; SV 1; linear; genomic RNA; STD; VRL; 822 BP.
XX
AC   JQ361093;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   25-APR-2012 (Rel. 112, Last updated, Version 1)
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DE   Lily mottle virus isolate LMoV-HN coat protein gene, partial cds.
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KW   .
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OS   Lily mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-822
RA   Wang L., Kong B., Zhao D., Chen H.;
RT   "Detection of Lily mottle virus in Native breed by RT-PCR";
RL   Unpublished.
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RN   [2]
RP   1-822
RA   Wang L., Kong B., Zhao D., Chen H.;
RT   ;
RL   Submitted (04-JAN-2012) to the INSDC.
RL   Department of Phytopathology, Yunnan Agricultural University, National
RL   Center for Agricultural Biodiversity, Kunming, Yunnan Province 650201,
RL   China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Lily mottle virus"
FT                   /host="Lilium longiflorum Thumb. (lily)"
FT                   /isolate="LMoV-HN"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Hunan"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:32624"
FT   CDS             <1. .>822
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="AFI26381.1"
FT                   /translation="ANETLNAGASSSTQASRSTRPEAAIDVAPQQSSEARVRDRDVDAG
FT                   TVGTYQIPRLKALATKINVPKVKGRMIVNTGHLVNYNPDQTDISNTRSTQKQFEAWYNA
FT                   VKDEYGLNDESMALAMNGLMVWCIENGTSPNVNGVWLMMDGDQQVEFPLRPILEHAKPT
FT                   LRQIMAHFSNLAEAYIEKQNLEKPYMPRYGLQRNLTDFNLARFAFDFYEVTSRTPARAK
FT                   EAHFQMKTAALRGKQSKLFGLDGKVNTQDEDTERHTADDVNKNMHSLLGISM"
XX
SQ   Sequence 822 BP; 255 A; 190 C; 198 G; 179 T; 0 other;

jq361093 Length: 822  25-APR-2012  Type: N  Check: 5625  ..

       1  gcaaatgaga cactcaatgc tggagcttcc agctccacac aagcgagccg
      51  atcgactcga cctgaggctg caattgatgt ggcaccgcaa cagagttctg
     101  aggctagagt gcgtgatcgt gatgttgatg ccggcaccgt gggaacatac
     151  caaatcccac gactgaaggc actagcaaca aagatcaacg tacccaaggt
     201  caaggggcga atgatagtga acactgggca ccttgtgaat tacaacccag
     251  accaaacaga tatttcaaat acaaggtcaa cccagaagca gtttgaggct
     301  tggtacaacg cagtgaaaga cgagtatggt ctcaacgacg agagtatggc
     351  tctcgcaatg aatggtctga tggtttggtg catagagaat ggcacctcac
     401  caaatgtaaa tggcgtgtgg ctcatgatgg acggagatca gcaagttgaa
     451  tttcctttac gtcctatact tgaacacgca aaaccgacgc tgcgccagat
     501  tatggcgcat ttctcaaacc tcgctgaagc ttatattgag aagcaaaatt
     551  tagagaaacc gtacatgcct aggtacggcc ttcagcgaaa tctcaccgac
     601  ttcaatctag cacgatttgc ttttgatttc tatgaagtta cttcacgcac
     651  gccagcacgc gctaaagaag cacactttca aatgaaaaca gccgctttac
     701  gtgggaaaca atcgaagcta tttgggctag atggaaaggt gaacacccaa
     751  gatgaggaca cggagaggca tacagcagat gatgtcaata aaaacatgca
     801  ctccttactt ggaatttcta tg