Sequence of DPV Lily mottle virus

Lily mottle virus isolate LMoV-AH P1 protein gene, partial cds.

ACC No: JQ361113

Dated: 2012-04-25 | Length: 927 | CRC: 722056661

                
ID   JQ361113; SV 1; linear; genomic RNA; STD; VRL; 927 BP.
XX
AC   JQ361113;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   25-APR-2012 (Rel. 112, Last updated, Version 1)
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DE   Lily mottle virus isolate LMoV-AH P1 protein gene, partial cds.
XX
KW   .
XX
OS   Lily mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-927
RA   Wang L., Kong B., Chen H.;
RT   "Detection of Lily mottle virus in Lily by RT-PCR";
RL   Unpublished.
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RN   [2]
RP   1-927
RA   Wang L., Kong B., Chen H.;
RT   ;
RL   Submitted (05-JAN-2012) to the INSDC.
RL   Department of Phytopathology, Yunnan Agricultural University, National
RL   Center for Agricultural Biodiversity, Kunming, Yunnan Province 650201,
RL   China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .927
FT                   /organism="Lily mottle virus"
FT                   /host="Lilium longiflorum Thumb. (lily)"
FT                   /isolate="LMoV-AH"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Anhui"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:32624"
FT   CDS             <1. .>927
FT                   /codon_start=1
FT                   /product="P1 protein"
FT                   /note="P1"
FT                   /protein_id="AFI26401.1"
FT                   /translation="ASFMVGSILVNTASVLKESFAQKVLTTPLVLVAQPVQRGFGAARM
FT                   CARKAIADDEKKVAKAFSALEARCAARASRMGTIRVKVTRSGTLRAQPLPKREQARLRK
FT                   AERKARLEHEEFLKGSPTVIAHISIAGGAQPSKDMVEPTPTRKAPWHSVSKKARKAIPR
FT                   SPTLNETGLASLMRAIAKIGAKNSTKVEIVDKRKVQARYIKRDAGSYLQVRVAHHEGLR
FT                   RRRDLKLSAFADQCLTQLVSTTHGTKYHHVTQLKAGDSGIVLLARRLFGWHSGSCSQIF
FT                   VVRGNHEGKLYEARRKVTLTMTHKMIHY"
XX
SQ   Sequence 927 BP; 255 A; 229 C; 262 G; 181 T; 0 other;

jq361113 Length: 927  25-APR-2012  Type: N  Check: 2240  ..

       1  gcctcattca tggtcggatc gatccttgtg aacaccgcaa gcgtcctgaa
      51  agagagcttt gcacagaaag tgctcacaac acctctagtg ttggtagcac
     101  agcctgtgca gaggggcttt ggtgcggcac ggatgtgtgc acgcaaagca
     151  attgcagatg atgaaaagaa ggtggccaaa gccttctcag ctctggaagc
     201  acggtgtgct gctagggctt caaggatggg aaccatccgc gtgaaggtca
     251  cgcggtctgg aaccttgcgg gcgcagccac ttccaaaaag ggagcaggca
     301  cgtcttagga aggctgagcg taaggcacgc ttggagcatg aagagtttct
     351  gaaaggaagc cccactgtca ttgctcacat cagcatagct ggtggcgcgc
     401  agccttcaaa ggacatggtg gagccaacgc ccacacgaaa ggcaccatgg
     451  cattcagtga gcaagaaagc tcgaaaagca atcccgcgct ccccaacact
     501  gaatgaaact gggcttgcat cattgatgcg agccattgca aagattgggg
     551  ccaagaattc cacgaaagtt gaaatcgtgg ataagcgaaa agtgcaagca
     601  cgctacataa agcgtgatgc agggtcatac ctgcaagtgc gcgtcgcgca
     651  ccatgagggc ctaaggcgta ggcgtgattt gaaactctct gcatttgcag
     701  accagtgctt aacacaactt gtcagcacta cccacgggac gaagtaccac
     751  cacgtaaccc agcttaaagc gggtgacagt ggaatcgttc tgttagcacg
     801  cagactcttt gggtggcaca gcggtagttg tagccaaatc ttcgtcgtgc
     851  gtgggaatca tgaaggcaag ttatatgagg cacggcgcaa ggtgactcta
     901  actatgacac acaaaatgat ccactac