Sequence of DPV Lily mottle virus

Lily mottle virus isolate LMoV-YX P1 protein gene, partial cds.

ACC No: JQ361121

Dated: 2012-04-25 | Length: 927 | CRC: 1678495062

                
ID   JQ361121; SV 1; linear; genomic RNA; STD; VRL; 927 BP.
XX
AC   JQ361121;
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DT   25-APR-2012 (Rel. 112, Created)
DT   25-APR-2012 (Rel. 112, Last updated, Version 1)
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DE   Lily mottle virus isolate LMoV-YX P1 protein gene, partial cds.
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KW   .
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OS   Lily mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-927
RA   Wang L., Kong B., Chen H.;
RT   "Detection of Lily mottle virus in Lily by RT-PCR";
RL   Unpublished.
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RN   [2]
RP   1-927
RA   Wang L., Kong B., Chen H.;
RT   ;
RL   Submitted (05-JAN-2012) to the INSDC.
RL   Department of Phytopathology, Yunnan Agricultural University, National
RL   Center for Agricultural Biodiversity, Kunming, Yunnan Province 650201,
RL   China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .927
FT                   /organism="Lily mottle virus"
FT                   /host="native lily"
FT                   /isolate="LMoV-YX"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Yuxi"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:32624"
FT   CDS             <1. .>927
FT                   /codon_start=1
FT                   /product="P1 protein"
FT                   /note="P1"
FT                   /protein_id="AFI26409.1"
FT                   /translation="ASFTVGSILVNTASVLKESFAQKVLTTPPVLVAQPVQRSFGAARM
FT                   CARKAIADDEEKVAKAFSALEARCAARVSRMGTIRVKVTRSGTSRAQPLPKREQARLRK
FT                   AERKARLDREEFLKGSPTVIDHISIAGGAQPSQDMVEPMSTRKAPWHSVSKKARKVIPH
FT                   SPTLNETGLASLMRAIAKIGAKNSTKVEIVDKRRVQARYIKRDAGSYLQVRVAHHEGLR
FT                   RRRDLKLSAFADQCLTQLVSTTHGMKYHHVTQLKAGDSGIVLLARRLFGWHSGSCSQIF
FT                   VVRGNHEGKLYEARRKVTLTMTHKMIHY"
XX
SQ   Sequence 927 BP; 254 A; 231 C; 261 G; 181 T; 0 other;

jq361121 Length: 927  25-APR-2012  Type: N  Check: 1921  ..

       1  gcctcattca cggtcggatc gatccttgtg aacaccgcaa gcgtcctgaa
      51  agaaagcttt gcacagaaag tgctcacgac acctccagtg ttggtagcac
     101  agcctgtgca gaggagcttt ggtgcggcac ggatgtgtgc acgcaaagca
     151  atcgcagatg atgaagagaa ggtggccaaa gccttctcag ctctggaagc
     201  acggtgtgct gccagggtct caaggatggg aaccatccgc gtgaaggtca
     251  cgcggtctgg aacctcgcgg gcgcagccac tcccaaaaag ggagcaggca
     301  cgtcttagga aggctgaacg taaggcacgc ttggatcgtg aagagtttct
     351  taaaggaagc cccactgtca ttgatcacat cagtatagct ggtggcgcgc
     401  agccttcaca ggacatggtg gagccaatgt ccacacgaaa ggcaccatgg
     451  cattcagtga gcaagaaagc tcgaaaagta atcccgcact ccccaacact
     501  gaatgaaact gggcttgcat cattgatgcg agccattgca aagattgggg
     551  ccaagaattc cacgaaagtt gaaatcgtgg ataagcgaag agtgcaagca
     601  cgctacataa agcgtgatgc agggtcatac ctgcaagtgc gcgtcgcgca
     651  ccatgagggc ctaaggcgta ggcgtgactt gaaactctct gcatttgcag
     701  accagtgcct aacacaactt gtcagcacta cccacgggat gaagtaccac
     751  cacgtaaccc agcttaaagc gggtgacagt gggatcgttc tgttagcacg
     801  cagactcttt gggtggcaca gcggtagttg tagccaaatt ttcgtcgtgc
     851  gtggaaatca tgaaggcaag ttatatgagg cacggcgcaa ggtgactcta
     901  actatgacac acaagatgat ccactac