Sequence of DPV Soybean mosaic virus

Soybean mosaic virus isolate 3T1-3 P1 gene, partial cds.

ACC No: JQ361579

Dated: 2013-01-31 | Length: 924 | CRC: -1386465154

                
ID   JQ361579; SV 1; linear; genomic RNA; STD; VRL; 924 BP.
XX
AC   JQ361579;
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DT   31-JAN-2013 (Rel. 115, Created)
DT   31-JAN-2013 (Rel. 115, Last updated, Version 1)
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DE   Soybean mosaic virus isolate 3T1-3 P1 gene, partial cds.
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KW   .
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OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-924
RA   Oliveros O.A., Gordillo L.A.;
RT   "Incidence and diversity of Soybean Mosaic virus on Passiflora edulis
RT   Sims";
RL   Unpublished.
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RN   [2]
RP   1-924
RA   Oliveros O.A., Gordillo L.A.;
RT   ;
RL   Submitted (04-JAN-2012) to the INSDC.
RL   Agronomy, Universidad Nacional de Colombia, AV 45 No 26-85, Bogota 0000,
RL   Colombia
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /organism="Soybean mosaic virus"
FT                   /host="Passiflora edulis"
FT                   /isolate="3T1-3"
FT                   /mol_type="genomic RNA"
FT                   /country="Colombia"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>924
FT                   /codon_start=1
FT                   /product="P1"
FT                   /protein_id="AFV80183.1"
FT                   /translation="QMATIMIGSMAISVPNTHVSCASNSVMPVQAVQMAKQVPSARGVF
FT                   YTLKRESSMQVHKYEEAMRKFQEAFDQDVGIQQRLLINKHSPIQSTKNGLTLRHLTLEQ
FT                   ARAKEAAIAKQKQEEEDFLNGKYEQQFYAGVSATESMKFEGGSVGFRTKYWRPTPKKTK
FT                   ERRATPQCRKPTYVLEEVLSIASKSGKPVEFITGKGKRVKVCYARKHGAILPKFSLPHE
FT                   EGKYIHQELQYASTYKFLPYICKFAKYKSINADDITYGDSGLLFDERSSLTTNHTKLPY
FT                   FVVRGRRNGKLVNALEVVENMEDYQHY"
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SQ   Sequence 924 BP; 305 A; 175 C; 220 G; 224 T; 0 other;

jq361579 Length: 924  31-JAN-2013  Type: N  Check: 1104  ..

       1  caaatggcaa caatcatgat tggaagcatg gcgatttctg tgccaaacac
      51  tcacgtctcg tgcgcatcga attctgtgat gccggttcaa gcagttcaga
     101  tggcaaaaca agtgccttct gctcgagggg tgttctacac acttaagaga
     151  gagagcagca tgcaagtaca taagtatgag gaggcaatgc gtaaatttca
     201  agaagcattc gaccaagatg ttggcattca gcaaaggctt ctaataaaca
     251  agcatagtcc catacaatcc acaaagaatg gtttgacctt gcgtcacttg
     301  actttagagc aggctcgagc aaaagaagcg gcaattgcaa agcaaaagca
     351  agaagaggaa gactttctca atgggaagta tgaacagcaa ttttacgctg
     401  gtgtttccgc tacagaatcc atgaagtttg aaggagggag tgttgggttc
     451  agaacgaagt actggagacc aactccaaag aagactaaag aaaggcgtgc
     501  aacaccacag tgtaggaaac caacatatgt tttggaggaa gttctttcta
     551  tagcttcaaa gagtggtaag ccagttgagt ttatcacagg caaagggaag
     601  agagtcaaag tctgttacgc gcgtaagcat ggcgcaatat tgcccaagtt
     651  ctccctcccg catgaagaag gcaaatatat ccatcaggag cttcaatatg
     701  caagcacata taaatttctt ccatatattt gcaagtttgc aaaatataag
     751  agcataaatg cggatgatat aacttatgga gatagtggtt tactatttga
     801  tgagcgatca tctttaacca caaatcacac taagttaccg tactttgttg
     851  ttcggggaag gaggaatggg aagctcgtta acgctcttga agtggttgaa
     901  aacatggagg attatcaaca ctac