Sequence of DPV Cotton leaf curl Multan virus
Cotton leaf curl Multan virus isolate G11 segment DNA-A, complete sequence.
ACC No: JQ424826
Dated: 2013-05-07 | Length: 2737 | CRC: -110380826
ID JQ424826; SV 1; circular; genomic DNA; STD; VRL; 2737 BP.
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AC JQ424826;
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DT 07-MAY-2013 (Rel. 116, Created)
DT 07-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE Cotton leaf curl Multan virus isolate G11 segment DNA-A, complete sequence.
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KW .
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OS Cotton leaf curl Multan virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2737
RA Tang Y.F., He Z.F.;
RT "Molecular characteristics of DNA-A of Cotton leaf curl Multan virus and
RT its satellite DNA that infects Malvaiscus arboreus var. penduliflorus";
RL Unpublished.
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RN [2]
RP 1-2737
RA Tang Y.F., He Z.F.;
RT ;
RL Submitted (19-JAN-2012) to the INSDC.
RL Plant Protection Research Institute, Guangdong Academy of Agricultural
RL Sciences, Jinying Rd No. 7, Tianhe District, Guangzhou, Guangdong 510640,
RL China
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FH Key Location/Qualifiers
FH
FT source 1. .2737
FT /organism="Cotton leaf curl Multan virus"
FT /segment="DNA-A"
FT /host="Malvaviscus penduliflorus MAGD-11"
FT /isolate="G11"
FT /mol_type="genomic DNA"
FT /country="China"
FT /collected_by="Z.F.He"
FT /collection_date="02-Oct-2011"
FT /db_xref="taxon:223252"
FT gene 116. .481
FT /gene="av2"
FT CDS 116. .481
FT /codon_start=1
FT /gene="av2"
FT /product="AV2"
FT /note="precoat protein"
FT /protein_id="AFJ00774.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYDLIRDL
FT ICILRSRNYVEASCRYRHFNARVESTSASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ
FT EAQNISDVQKSGCSKGL"
FT gene 276. .1046
FT /gene="av1"
FT CDS 276. .1046
FT /codon_start=1
FT /gene="av1"
FT /product="AV1"
FT /note="coat protein"
FT /protein_id="AFJ00778.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTNRVAVPIVRVTKQQAWT
FT NRPMNRKPRIYRMYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIWMDENIKTRNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(1049. .1453)
FT /gene="ac3"
FT CDS complement(1049. .1453)
FT /codon_start=1
FT /gene="ac3"
FT /product="AC3"
FT /note="replication enhancer protein"
FT /protein_id="AFJ00775.1"
FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKTISHFNRPFTTNMDI
FT LTIRIQFNYNTRKALGLHKCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVISINL
FT VIKAVEHVLYNVIQQTMYVDQYSEIEFKLY"
FT gene complement(1146. .1598)
FT /gene="ac2"
FT CDS complement(1146. .1598)
FT /codon_start=1
FT /gene="ac2"
FT /product="AC2"
FT /note="transcriptional activator protein"
FT /protein_id="AFJ00779.1"
FT /translation="MRSSSLSKDHCTQLPIKVQHREAKRRNRRRRVDLECGCSYYLSIN
FT CHNHGFTHRGTHHCSSSREWRIYLGGSKSPLFQDNQPLQPSIHDEYGHTHDPNPVQLQH
FT SESSGTAQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISEQSRCNFN"
FT gene complement(1495. .2586)
FT /gene="ac1"
FT CDS complement(1495. .2586)
FT /codon_start=1
FT /gene="ac1"
FT /product="AC1"
FT /note="rep protein"
FT /protein_id="AFJ00776.1"
FT /translation="MAPPKRFKIQAKNYFLTYPQCSLTKEEALSQIQAINTPSNKKYIK
FT VCRELHEDGSPHLHVLIQFEGKLICTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKDYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH
FT NLNANLDRIFQEPPAPYVSPFSFSSFDQVPEELQVWALDNVVDAAARPLRPRSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLNEEKNTALKNWALKNAIFITLEGPL
FT YSASNQSTAQGSEETQQEEESRS"
FT gene complement(2127. .2429)
FT /gene="ac4"
FT CDS complement(2127. .2429)
FT /codon_start=1
FT /gene="ac4"
FT /product="AC4"
FT /note="transcriptional regulator protein"
FT /protein_id="AFJ00777.1"
FT /translation="MGALISMCSSSSRANSSARITDSSTWYPQPGQHISIRTFRELNQA
FT QMSRTTSTRTGTLSSGESFRSMEDQQEEDNRQPTTLTPQRLTREVSQRLLESLRN"
XX
SQ Sequence 2737 BP; 705 A; 544 C; 644 G; 844 T; 0 other;
jq424826 Length: 2737 07-MAY-2013 Type: N Check: 4065 ..
1 accggatggc cgcgcgattt ttttgtgggc cccctattta tgagattgct
51 ccctcaaagc taaataacgc tcccgcccac tataagtact tgcgcactaa
101 gtttcaaatt caaacatgtg ggatccattg ttaaacgaat ttcctgatac
151 ggtgcacggg tttcggtgta tgctttctgt caaatatttg caacttttgt
201 cgcaggatta ttcaccggat accctaggtt acgatttaat acgggattta
251 atctgtattc tacgttcccg taattatgtc gaagcgagct gcagatatcg
301 tcatttcaac gcccgcgtcg aaagtacgtc ggcgtctgaa cttcggcagc
351 ccatacacca accgtgttgc tgtccccatt gtccgcgtca caaaacaaca
401 ggcatggaca aacaggccta tgaacaggaa gcccagaata tatcggatgt
451 acagaagtcc ggatgttcca aagggttgtg aaggcccatg taaggtacag
501 tcttttgagt ccagacatga tgttgttcat attggtaagg taatgtgtat
551 ttctgatgtt actcgtggtg tcggtttgac ccatcgtatt ggtaaacgtt
601 tttgtgtcaa gtcagtttat gttttaggta agatatggat ggatgaaaat
651 ataaagacca ggaatcacac gaattcggtc atgttctttt tagttcgcga
701 tcgacgacct gttgacaaac ctcaggattt tggtgaggta ttcaatatgt
751 ttgataacga acccagtaca gcaactgtga agaatagtca tagggaccgt
801 tatcaggtgt tgaggaaatg gcatgcaacc gttacgggtg gtcaatatgc
851 gagtaaggaa caggctttgg tcaagaagtt tgtcagagtt aacaattatg
901 ttgtttacaa tcaacaggaa gcaggaaaat acgagaatca tacggaaaat
951 gcgttaatgc tttatatggc ttgtacccac gctagcaacc ctgtttatgc
1001 tacgttgaag attaggatat atttttatga ctctgtaacg aattgatgtt
1051 aataaagttt gaattctatt tctgaatatt gatctacata catagtttgt
1101 tggattacat tgtacaatac atgttctaca gctttaataa ctaaattaat
1151 tgaaattaca ccgagattgt tcagatattt gaggacttgg gttttgaata
1201 cccttaagaa aagaccagtc tgagggtgta aggtcgtcca gattcggaag
1251 gttagaaaac acttgtgcag tcccagagct ttccgagtgt tgtagttgaa
1301 ctggattcgg atcgtgagta tgtccatatt cgtcgtgaat ggacggttga
1351 agtggctgat tgtcttgaaa taaaggggat ttggaacctc ccagatatat
1401 gcgccattcc ctgcttgagc tgcagtgatg ggttcccctg tgcgtgaatc
1451 catggttgtg gcagttgatt gacagataat aagaacaccc gcattcaaga
1501 tctactctcc tcctcctgtt gcgtctcttc gcttccctgt gctgtacttt
1551 gattggaagc tgagtacagt ggtccttcga gagtgatgaa gatcgcattt
1601 tttagggccc aattctttaa tgctgtgttt ttttcctcgt tgaggaattc
1651 cttataactg ctgttgggac caggattgca caagaagatt gtcggtattc
1701 cgcctttaat ttgaactggc ttaccgtatt ttgtgttgga ctgccagtct
1751 ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat gcgggtcgac
1801 gtcatcaatg acgttgtacc aggcgtcgtt actgtatact ttgggactca
1851 ggtccagatg tccgcacaaa tagttatgtg gtcccaatga cctagcccac
1901 atcgtctttc ccgtacgact atctccctca attactatac ttcgaggtct
1951 aaggggccgc gcagcggcat cgacaacgtt atccaacgcc caaacttgaa
2001 gttcttctgg aacttgatcg aacgaagaaa aagaaaaagg agaaacataa
2051 ggagctggtg gctcctgaaa gatcctgtct agatttgcat ttaaattatg
2101 aaattgtagt acaaaatctt taggagctag ttccttaatg actctaagag
2151 cctctgactt acttcccgcg ttaagcgctg cggcgtaagc gtcgttggct
2201 gtctgttgtc ctcctcttgc tgatcttcca tcgatctgaa actctcccca
2251 ctcgagagtg tccccgtcct tgtcgatgta gtccttgaca tctgagcttg
2301 atttagctcc ctgaatgttc ggatggaaat gtgctgacct ggttggggat
2351 accaggtcga agaatctgtt attcgtgcag atgagtttgc cctcgaactg
2401 gatgagcaca tggagatgag ggctcccatc ttcgtgtaac tctctgcaga
2451 ctttgatgta ttttttattc gagggtgtgt tgatggcttg aatttgggaa
2501 agtgcttcct ctttagtgag tgagcactgt ggataagtga ggaaataatt
2551 tttggcttgt attttaaaac gtttgggggg agccattgac tttggtcaat
2601 tggagacaac tgattggatt ttactctggc aattggagac tggagacaat
2651 ttatagtgtc tccaaatggc attatcgtaa tttgagaaat catttcaaaa
2701 tcctcacgct ccaaaaagcg gccatccgta taatatt